test.py

# python standard library
import sys
# ensure Python 3.5
assert sys.version_info[0:2] == (3, 5), sys.version_info
import os
import operator
import itertools
import collections
import functools
import glob
import csv
import datetime
import bisect
import sqlite3
import subprocess
import random
import gc
import shutil
import shelve
import contextlib

# third party packages

import PyQt4
import cython
import numpy as np
import scipy
import numba
import numexpr
import bokeh
import h5py
import tables
import bcolz
import pandas
import dask
import IPython
import rpy2
import statsmodels
import sklearn
import sh
import sqlalchemy
import pymysql
import psycopg2
import petl
import humanize
import matplotlib as mpl
import matplotlib_venn as venn
import seaborn as sns
import Bio
import pyfasta
import pysam
import pysamstats
import petlx
import vcf
import vcfnp
import intervaltree
import anhima
from mpl_toolkits.basemap import Basemap
import allel