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Converting Xenium object from R #87

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man154 opened this issue Mar 12, 2024 · 0 comments
Open

Converting Xenium object from R #87

man154 opened this issue Mar 12, 2024 · 0 comments

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@man154
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man154 commented Mar 12, 2024

Hi,
I'm trying convert a Xenium object from R. I'm getting the error below. Any suggestions?
The Xenium object was created using the Seurat spatial vignette workflow

sceasy::convertFormat(xenium.obj[["Xenium"]], from="seurat", to="anndata", outFile='output.h5ad')
Error in compareVersion(as.character(obj@version), "3.0.0") : no slot of name "version" for this object of class "Assay5"

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