diff --git a/.github/workflows/README.md b/.github/workflows/README.md new file mode 100644 index 00000000..2dd269fd --- /dev/null +++ b/.github/workflows/README.md @@ -0,0 +1,3 @@ +This directory stores workflow scripts that are picked up by GitHub Actions to automatically perform test installations of V-pipe on Mac OS and Linux systems and run end-to-end tests by executing tutorials with real example data. +This ensures successful installation and reproducible execution on different systems. +For each update of V-pipe these workflow scripts are automatically executed and report about installation problems or troubles on the test data diff --git a/README.md b/README.md index 0571757d..d915b61c 100644 --- a/README.md +++ b/README.md @@ -33,6 +33,11 @@ Also see [snakemake's documentation](https://snakemake.readthedocs.io/en/stable/ Tutorials introducing usage of V-pipe are available in the [docs/](docs/README.md) subdirectory. + +### Tutorials + +Tutorials for your first steps with V-pipe for different scenarios are available in the [docs/](docs/README.md) subdirectory. + ### Using quick install script To deploy V-pipe, use the [installation script](utils/README.md#quick-installer) with the following parameters: @@ -50,6 +55,8 @@ cd work ./vpipe --jobs 4 --printshellcmds --dry-run ``` +Test data to test your installation is available with the tutorials provided in the [docs/](docs/README.md) subdirectory. + ### Using Docker Note: the [docker image](https://github.com/cbg-ethz/V-pipe/pkgs/container/v-pipe) is only setup with components to run the workflow for HIV and SARS-CoV-2 virus base configurations. diff --git a/config/drosophila_c_virus.yaml b/config/drosophila_c_virus.yaml new file mode 100644 index 00000000..a365be09 --- /dev/null +++ b/config/drosophila_c_virus.yaml @@ -0,0 +1,32 @@ +# config-file used for the analysis of drosphila C virus Illumina samples +# Lezcano et al., Virus Evolution, 2023, https://doi.org/10.1093/ve/vead074 +# NCBI BioProject accession number PRJNA993483 + +general: + aligner: "bwa" + snv_caller: "shorah" + +input: + reference: resources/drosphila_c_virus/NC_001834.1.fasta + datadir: resources/samples/ + read_length: 100 + samples_file: samples.tsv + paired: true + +consensus_bcftools: + max_coverage: 150000 + +snv: + consensus: false + disk_mb: 1250 + mem_mb: 35000 + time_min: 6000 + threads: 64 + +output: + snv: true + local: true + global: false + visualization: false + diversity: false + QA: false diff --git a/config/h3n2_ha.yaml b/config/h3n2_ha.yaml new file mode 100644 index 00000000..faabd98b --- /dev/null +++ b/config/h3n2_ha.yaml @@ -0,0 +1,75 @@ +# config-file used for the analysis of H3N2 segment HA +# config file was used to analysis wastewater Illumina data from SRA available +# through the SRA Run accession: SRP385331 + +general: + aligner: bwa + primers_trimmer: samtools + threads: 6 + snv_caller: lofreq + temp_prefix: ./temp + preprocessor: skip + +input: + datadir: samples/ + samples_file: samples.tsv + reference: "{VPIPE_BASEDIR}/../resources/h3n2_ha/h3n2_ha.fasta" + genes_gff: "{VPIPE_BASEDIR}/../resources/h3n2_ha/gffs/h3n2_ha.gff3" + paired: true + read_length: 151 + +output: + datadir: results/ + snv: True + local: True + global: False + visualization: False + QA: False + diversity: False + +gunzip: + mem: 100000 + +extract: + mem: 100000 + +preprocessing: + mem: 10000 + +sam2bam: + mem: 5000 + +ref_bwa_index: + mem: 65536 + +bwa_align: + mem: 40690 + threads: 8 + +bowtie_align: + mem: 12288 + threads: 6 + +coverage: + mem: 131072 + threads: 32 + time: 60 + +minor_variants: + mem: 16384 + threads: 64 + +coverage_intervals: + coverage: 0 + mem: 2000 + threads: 1 + +lofreq: + consensus: false + +snv: + consensus: false + localscratch: $TMPDIR + time: 240 + mem: 1024 + threads: 64 diff --git a/config/herpes_simplex_virus_2.yaml b/config/herpes_simplex_virus_2.yaml new file mode 100644 index 00000000..26b01c09 --- /dev/null +++ b/config/herpes_simplex_virus_2.yaml @@ -0,0 +1,34 @@ +# config-file used for the analysis of herpes_simplex_virus_2 Illumina samples +# Lezcano et al., Virus Evolution, 2023, https://doi.org/10.1093/ve/vead074 +# deletion analysis +# analysed sample is from López-Muñoz AD, Rastrojo A, Kropp KA, Viejo-Borbolla A, Alcamí A. Combination of long- and short-read sequencing fully resolves complex repeats of herpes simplex virus 2 strain MS complete genome. Microb Genom. 2021 Jun;7(6). +# Sample accession number: ERR3278849 + +general: + aligner: "bwa" + snv_caller: "shorah" + +input: + reference: resources/herpes_simplex_virus_2/MK855052.1.fasta + datadir: resources/samples/ + read_length: 250 + samples_file: samples.tsv + paired: true + +consensus_bcftools: + max_coverage: 150000 + +snv: + consensus: false + disk_mb: 1250 + mem_mb: 35000 + time_min: 6000 + threads: 64 + +output: + snv: true + local: true + global: false + visualization: false + diversity: false + QA: false diff --git a/config/polio.yaml b/config/polio.yaml new file mode 100644 index 00000000..d3254dea --- /dev/null +++ b/config/polio.yaml @@ -0,0 +1,25 @@ +# config-file used for the analysis of poliovirus MinION samples +# sample accession number: ERR4027774 (Shaw et al., 2020, DOI: https://doi.org/10.1128/jcm.00920-20) + +general: + virus_base_config: "" + aligner: minimap + preprocessor: skip + +input: + reference: resources/polio/AY560657.1.fasta + datadir: resources/samples/ + samples_file: config/samples.tsv + paired: false + +output: + trim_primers: false + snv: false + local: false + global: false + visualization: false + QA: false + diversity: false + +minimap_align: + preset: map-ont diff --git a/config/rsvb.yaml b/config/rsvb.yaml new file mode 100644 index 00000000..35a77ed5 --- /dev/null +++ b/config/rsvb.yaml @@ -0,0 +1,27 @@ +# config file for Human respiratory syncytial virus B +# config file is used to process Illumina RSV samples + +general: + virus_base_config: "" + preprocessor: "prinseq" + aligner: "bwa" + primers_trimmer: "samtools" + +input: + datadir: "samples/" + samples_file: "samples.tsv" + read_length: 251 + primers_bedfile: "{VPIPE_BASEDIR}/../resources/rsvb/RSVB_primers_400_V2.1.bed" + inserts_bedfile: "{VPIPE_BASEDIR}/../resources/rsvb/RSVB_inserts_400_V2.1.bed" + reference: "{VPIPE_BASEDIR}/../resources/rsvb/MT107528.1.fasta" + +output: + datadir: "results" + trim_primers: true + snv: false + local: false + global: false +snv: + consensus: false +lofreq: + consensus: false diff --git a/resources/auxiliary_workflows/benchmark/resources/multi_setup/README.md b/resources/auxiliary_workflows/benchmark/resources/multi_setup/README.md new file mode 100644 index 00000000..c3d5662f --- /dev/null +++ b/resources/auxiliary_workflows/benchmark/resources/multi_setup/README.md @@ -0,0 +1,20 @@ +This repository contains the Snakemake workflow to reproduce the benchmarking study for the global haplotype reconstruction methods presented in https://doi.org/10.1101/2023.10.16.562462. + +The notebooks in the directory `workflow/notebooks/` can be used to reproduce the figures of Figure 4. + +Here is a step-by-step guide on how to run this workflow. +1. Clone the repository of V-pipe 3.0 into your working directory: `git clone https://github.com/cbg-ethz/V-pipe.git` +2. Go into the directory of the benchmarking study for the global haplotype reconstruction `cd V-pipe/resources/auxiliary_workflows/benchmark/resources/multi_setup` +3. The parameters to reproduce the synthetic dataset of varying coverage is here: `config_varycoverage/params.csv` with the configuration file `config_varycoverage/config.yaml` where simulation mode, replicate number and methods to be executed are defined. +4. The parameters to reproduce the synthetic dataset of varying distance pattern is here: `config_varyparams/params.csv` with the configuration file `config_varyparams/config.yaml` where simulation mode, replicate number and methods to be executed are defined. +5. The parameters to reproduce the real dataset is here: `config_realdata/params.csv` with the configuration file `config_realdata/config.yaml` where replicate number and methods to be executed are defined. +6. The methods to execute must be define in a Python script in this directory: `V-pipe/resources/auxiliary_workflows/benchmark/resources/method_definitions` +- Haploclique: `V-pipe/resources/auxiliary_workflows/benchmark/resources/method_definitions/haploclique.py` +- PredictHaplo: `V-pipe/resources/auxiliary_workflows/benchmark/resources/method_definitions/predicthaplo.py` +- HaploConduct: `V-pipe/resources/auxiliary_workflows/benchmark/resources/method_definitions/haploconduct.py` +- CliqueSNV: `V-pipe/resources/auxiliary_workflows/benchmark/resources/method_definitions/cliquesnv.py` +7. Now the workflow is ready, go back to the directory `V-pipe/resources/auxiliary_workflows/benchmark/resources/multi_setup`. +8. To install the needed Conda environments execute: `snakemake --conda-create-envs-only --use-conda -c1`. +9. To submit the workflow to a lsf-cluster execute `./run_workflow.sh`, otherwise execute the workflow with `snakemake --use-conda -c1` +10. The workflow will provide the results in the directory `results`. +11. When the workflow has terminated and all result files were generated, figures from Figure 4 from the manuscript can be generated by executing the notebooks in `workflow/notebooks/`. diff --git a/resources/drosophila_c_virus/NC_001834.1.fasta b/resources/drosophila_c_virus/NC_001834.1.fasta new file mode 100644 index 00000000..bac48aec --- /dev/null +++ b/resources/drosophila_c_virus/NC_001834.1.fasta @@ -0,0 +1,134 @@ +>NC_001834.1 Drosophila C virus strain EB, complete genome +TTTATATCGTGTGTACATATAAATATGTACACACGGCTTTTAGGTAGAATATTGTTTTCAATGTTGATTT +TAAAGGTAACTTTGGTTATTATGCTTTACGGTTTTCATTGTTGATGGTATTTGTGGCCTGCGGTCCCTAA +TTGTTGAATTATTTATTCTGATACGTTGTTTTCATTGTTGATGGTAAGGATTCTTATTTTGAAGTGGTTT +TTCAGAAGATAACTCTAAATATGAATTATGCCTTATTGTTTTCAATGTTGATGGCCTTCGTTTAAATACT +CTTTGTTAATGACGGTAATCAAAGATTACATCTCAAACTTAGATTAATATTTTTAAGTAGGGTATACTGA +GTTAGTCCTCTCTCTTTACTGATTTTGATATCTGGTAATTGACTTCGAAGAAAGATGCGTCTTTTGGATT +TGTAATGACTGGGCCTTAAGTTCATAGGTGTTATTACATGGAGGAACACATTACTTTGGTTGATGATGAT +GTTTTGATGATGACTTTCAATGTATGTGCTTATGTTAAGCCTGACATAAGAACTTACTAGTTTGCATAAT +GCAAAGGGTTAGTATATGATTTTTAGTATGTGGATTTTGACACTGCCTTTGATTAGGATGTGTGAATGAT +TTTGAAACATATTAAGATGTTTATACGAGCGTGTTGTTTACTATTTTCAGGATATGTGGAAGCGGTTGTG +TATGATCTATACGCACATTTAGTTCCCAGAGGGCGTTGTCGTCTCCCCCTAAGCAAGGGAGAAACACGTG +GCACATGATCTTGCGCTTAACGATAAAAATGGAATCTGATAAAAGTATGGCCTGTTTAAATAGAATTTTG +ATGAATAAGATGATGTTTGTGGAAGATAAGATCTCTACCCTTAAGATGGTTGCTGATTATTATCAAAAAG +AAGTAAAGTATGATTTTGATGCAGTTGAATCTCCCCGTGAGGCACCTGTATTTAGATGTACTTGTCGATT +CCTTGGTTATACCATTATGACTCAAGGCATCGGTAAGAAGAATCCGAAACAGGAAGCTGCACGTCAGATG +TTGCTCTTGTTATCAGGAGATGTTGAGACTAACCCTGGACCCGTTCAATCGCGCCCCGTGTATTATCGTT +ACAACGACCCTAGATATACACGGTTGGAAAAAGCTATTGAACGTCGAGACGATAAAATTAAAACATTAAT +TAAAGAGTTGCGTCGACAAATCAAAAATAGGAAAATTTATTCCCAAGGAATGTTTGATAAATTAACTAAA +CAAATTTCTGATGGGATAAAAGATGGTGTTGGCTCTGAACAGATGAATGGAAATTTGACTCGTATTTGTG +ATTTCCTAGAGAACACTCTTCCTGGGTTACAAGCAAATATTCAAGCCACTGTGATTGATACAACAGACAA +ATATGTTTCTTTAAAAGAGGATATTATGAAGATTGTTTTAGTGATATTGCTTGTTCGTCTTTTAATGGTT +TGGAAGAAGTATCGTGCTTCTCTGTGTGTTATTTTAATCTTTATTTTTAAATTTTATGGATTCGATCAAA +AGTTGATTGATTTAATTATGGATTTGAAGAATAAAATATTTTCACAGGGTGCATTGGAAGATACAGTTGA +GGAGGTTGTATATCATCCTTGGTTCCATACGTGTGGAAAAATCATCTTTGCGGTTATGGCTTTCTTAACA +ATTAAGAAAATTCCTGGTAAACAGGATTGGGATAGTTACATAACACGTTTAGATCGTATCCCAAAATCTA +TTGAGGGAGCTAAAAAGATCACTGATTACTGTTCAGAATATTTTAATATTGCTAATGATCAGATCAAGAT +GATGGTTCTTGGAAAGACTAAAGAAGAATTGCAACGTGCTAATGGACTATATGGAGAAATTCAAGCTTGG +GCTCAAGAGGTTCGCCAGTATTTGGAATTGGATCAACGGAATAAAATTGATCTAGATACTGAAACCGCAA +ATCGTGTTGAACAACTTTGGATAAAGGGCTTGAAATTCAAGAGTGAACCCCTTTTGAGTAAGGAAATGTC +AGCTTTAGTTCATACAACTCTTTTACCAGCTAAGCAATTGTACGAGTATGTATCGTGTTCTCCTGTTAAA +GGGGGAGGACCACGTATGCGTCCAATTTGTTTATGGTTGGTAGGTGAATCAGGAGTTGGTAAGACTGAAA +TGGTATATCCATTGTGCATTGATGTTCTTCGGGAAATGGGGATGATTAAGAAAGATGATTTTCATCATCA +AGTTTATGGTCGTCAAGTTGAAACTGAATTCTGGGATGGTTATAAAGGACAGAAAATTGTCATTTATGAT +GATGCATTTCAGAAGAAAGATGACAAAACAGCAGCTAACCCAGAAATTTTTGAGGTTATTCGCTCTTGCA +ACACTTTTCCTCAGCATTTACATATGGCAGCTCTTCATGATAAAAATACTTTTTCTGCTGCTGAATTACT +CTTATATACCACTAATGATTATAATGTTAAGCTGGAATCTATTACTTTTCCCGATGCTTTCTTTAATCGT +ATGGGCGATATGGCTTATAAAGTTAGTCCTAAGAAAGAGTATGGTATTGAAACCGAGAAAGGGAATTCAG +GTAAAACTTATTTAAAATTGGATAAGAGTAAATTGGACAAAACAAAAGCTATTGACCTTTCAGTGTATGA +ATTCCAAAAAATTGTACGTGACGAGAAAAGTGATGCAGGTTGGATTGATTCTGGATCACCCTTGGACTAT +GAAGATTTTGCTAAATTAGTGTGTTCAAAATGGAAAGAAGCGAAACAATCTTCAATGAATAAATTGAAAT +TTTTGGAAGAATATGCTATTCGTGCTCAGGTTGGATCAGAAGAAAATTCTGAATATGGTGATTGTATAGA +TTTTGTCGATGATATTGCCAAACGCTTACAAAAAGGTGAAACTCTTGAAGAAATAGAGTTTGATTATGCC +TCAGATCCAGAGATGTTTACTCAATACTATCATTTTAAATCTACAATTAAACCGGCATCGCGTTGGCAGA +AGTATAAGGATCGGATGGACATTTGTTTGAGCGACTGTAAGACTTATTTAGCAAAGAAATACGAAGAAAT +TAAGAAAATTCTTGCCGAACATCCTATCTTGACGATTTTAGGAATGATAGGGGTTGCCTTATCTGCTCTG +GCAATGTACTATTGGTTTTCTAAATCGTTGGATCCTGTAGAAGCCGAGGTTGCTCCTTCTGGTGACGCTA +AAACAGTGCGCTTACCAAGGAAACTCGTTGAGATTGGTGCTTCTGGAGATGTTAAAACACAGAAGATTGT +GAAACCCGTTGTAGAGACCGAATGGCATCGTAACAATAAAGGAGAGATTGAAATTTCTTGTGATGAATGT +GGTATGCATAGGATGTCTGCATTTAACAATATGACAGATGAAGAATTTGATAACTGTACATATGAAGATT +TGAATAAGGACCAGAAACGTGAACTTGCCCAGTGGTCTACTAAAGATTCTTGGTTAGGTCGATTCTTTTT +GAGTCGAGATCGCAAGAATAAGGTTGGAATTTGGGCCGAAGTGGGACAATCAGGTGATGTTAAAACAAAT +AAAGCTCAGATTAAACGTGTTGAAGCTGGAGCCGAAGAATTAGTTACTGTTGCTTTAACTCAAGGTTGTT +CTGATGATGCTGCACACAATTTGATGATTGACGTTTTCCAAAAAAATACATATAGAATGTCATACTTCCG +TGGAGACAAGCGTTATCAACTTGGAAATTGTACATTTGTTCGTGGTTGGTCTTTTATTATGCCATATCAT +TTTGTACAGGCTGTGTTTGCGCGAAGATTGCCACCTAACACGATTATTTCTTTGTCCCAACAGATGTCTG +AAGATTTAATGCAAATTCCATTATCACACTTCTTTTCTGCTGGTGTTGACAATTTTTATTTAACAGATAA +TTGTGTGCGCTTGCCATTTAAAAATGGAGATTTTCGCGATTGTGTTATGGTTAATTTACATTCACGAATG +TGCACGCCACATCGTGATTTGGTTCGGCATTTTATTTTAACTTCTGATCAAGGTAAATTGAAGGGATCTT +TTAGTGGTGCAATGGCAACTTTCCATGTTAACAATATGGGTTTATATCGTGTTTATAATTGGCTAAATGC +AGTTCGTCCTTGCGATAAAAAGATAGAAATTTTCCACCCTGAAGATGGTTTTGAGTATCCCGAAGAATCA +TATATTCAACGTGACTGTTATGAATATAATGCACCGACTCGTACTGGGGATTGTGGATCTATTATTGGAT +TGTATAATAAATATTTAGAAAGGAAAATCATCGGTATGCACATTGCTGGAAATGATGCAGAAGAGCATGG +TTATGCGTGCCCTTTGACACAAGAGTGTCTTGAGACTGCTTTTTCTGCTTTAGTAAATAAAAATAAGAAG +AATATTTCCTCACAATTTTATTATGAAATACCCAATATGGTTGATCCACTCGGTGATAGTAGTGTTCCTG +AAGGTAAGTTTTACGCTTTAGGAAAGTCATCTATTCGTGTGGGACAGGCAGTTAATTCGTCCATAATTCC +TTCTCGAATTTATGGGAAGTTGTCTGTTCCTACAATGAAACCAGCACTACTCAAGCCAACGATTCTGAAT +AACAAAGTACATAATCCTTTATTGTCGGGACTTAAGAAATGTGGTGTAGACACTGCGGTCTTGAGTGATG +ATGAAGTTTTGAGTGCTTCACAAGATGTTTGTCGTGTTATGTTGAACCAATATAATAAAAATTTGAATAA +AACAAAGTATCAACGCATTTTAACATATGAGGAAGCTATTCGTGGAACCCAAGATGATGAATTTATGTGT +GCTATTAATCGTACAACGTCACCAGGATTTCCTTATGCACAAATGAAAAGAAATGCTCCAGGTAAACAGC +AATGGATGGGTTTTGGTGAAGAATTTGATTTTACAAGTAATTATGCACTAGCTTTGCGGAAAGATGTTGA +ACAACTCATTGAAGATTGTGCTAGCGGAAAAATATCTAATGTCATTTTTGTAGATACATTGAAAGATGAG +CGACGCGATATAGCTAAAGTAAATGTAGGTAAAACGCGTGTATTTTCTGCAGGTCCTCAACATTTTGTAG +TTGCATTTCGCCAATATTTCCTACCTTTTGCTGCTTGGTTGATGCATAATCGCATTTCGAACGAAGTAGC +AGTTGGCACTAATGTTTATTCATCTGATTGGGAACGTATTGCAAAACGTCTTAAAACAAAAGGTAGTCAC +GTCATTGCGGGGGACTTTGGAAATTTCGATGGATCTTTAGTAGCACAAATTTTGTGGGCCATATTTTGGG +AAATTTTTGTTGTATGGCTTAAGCAATTTATTGATATAGAGAATTCAGAAGGAAAACGTATTTTATGTAT +CTGTCTTGGTTTGTGGTCACATTTAGTTCACTCTGTTCATATTTATGAAGATAATGTATATATGTGGACT +CATTCTCAACCTTCTGGCAATCCTTTCACTGTTATTATTAATTGCTTGTATAATTCGATTATTATGCGAC +TGTCATGGATTCGTGTGATGGAGAAATTTCAACCTAGACTTAAGTCCATGAAGTGGTTCAACGAATATGT +CGCCTTGATAACATATGGTGACGACAATGTTTTAAACATTGATGCAAAGGTTGTGGAATGGTTTAATCAG +ATTAACATTAGTGAGGTTATGACTGAAATGCGACATGAATATACGGACGAAGCTAAAACTGGTGATATTG +TTAAATCTCGTAAATTAGAAGATATTTTCTTTTTGAAGAGAAAATTTCGTTTTAGCCCAGAATTACAACG +CCATGTTGCTCCATTGAAGATCGAAGTTATTTATGAAATGTTGAATTGGTCTCGCCGCTCTATAGATCCA +GATGAAATCTTGATGTCGAACATTGAAACGGCTTTTCGTGAAGTAGTTTACCACGGAAAAGAAGAATACG +ATAAACTAAGGTCAGCGGTATTGGCGTTGAAGGTACCCCAGGAACTTCCTGAAAACCCTCAGATTTTGAC +GTACAACCAATATTTGCACGATATTGAATATCTTGCGGACCCTTTGTACGACTTTTAGTTAAGATGTGAT +CTTGCTTCCTTATACAATTTTGAGAGGTTAATAAGAAGGAAGTAGTGCTATCTTAATAATTAGGTTAACT +ATTTAGTTTTACTGTTCAGGATGCCTATTGGCAGCCCCATAATATCCAGGACACCCTCTCTGCTTCTTAT +ATGATTAGGTTGTCATTTAGAATAAGAAAATAACCTGCTAACTTTCAAACAAATAATAATAACATTGAAA +ATGAAGATCGGAAAATTACTTCCGAGCAAAAAGAGATTGTACACTTTTCTAGTGAAGGAGTTACCCCTAG +TACCACTGCGGTGCCTGATATCGTTAGTCTTTCAACAGATTATTTGTCTATGACTACTCGTGAAGATCGT +ATCCACACGATTAAAGATTTTCTTTCTCGTCCAATTATAATTCAAACTGGTCTTTGGTCTTCCGCTACAA +CTGCCGAAACTCAATTGTATACTGCTAATTTCCCTGAAGTGTTCATTTCTAATACTATGTATCAAGAAAA +GTTGCGTGGGTTCGTGGGTTTGCGAGCAACTTTAGTCATTAAAGTGCAAGTGAATTCCCAACCTTTCCAG +CAAGGACGATTGATGCTACAGTATTATCCGTATGCACAGTATATGCCTAACCGTGTTTCTTTGGTGAATT +CCACTCTCCAAGGACGCTCTGGTTGTCCTCGAACAGATTTGGATTTGAGCGTTGGTACGGAAGTTGAAAT +GCGAATTCCTTATGTGTCCCCTCATGTATATTACAATCTTATTACTGGACAAGGATCATTTGGCGCTATA +TATTTGGTTGTATATAGCCAACTAAGAGATCAAGTTACAGGAACAGGTTCTGTTGAATATACTGTTTGGG +CTCATTTGGAAGATGTAGATGTGCAATACCCGACCGGTGCAAACATTTTCACGGGTAGCTCTCCAAATTT +TGCCTCTTTGGGTCAGAAAATGAGTGATGGAAAATTCACTGAAAAAGACTTGAGAGATATTTGGACTTCA +AAAGCGTACAATAAACAACCAGACAAAATTTTCGCACAAGTGGCTTCTGAAATAACACAACTCAAAGAAT +CAGGAACAATTAGTTCTGGAATTGGACAAGTTTCTGAAGGTCTTTCTACCATGTCTAAAATCCCTATACT +CGGAAATATGTTTACAAAACCCGCCTGGATTTCAGCTCAAGTATCTAATATCTTCAAGATGCTTGGTTTT +TCAAAACCCACTGTTCAAGGTCTTCCTTGTGAATCGAAACTGCGTGGTCAAGTTCGAATGGCGAATTTTG +ATGGCGCTGATACATCACATAAATTGGCTTTGTCTGCCCAAAACGAAATTGAAACAAAATCTGGACTTTC +TGGAACTTCTCCTGATGAAATGGATTTATCACACGTCCTTTCCATACCAAATTTTTGGGATCGTTTTACT +TGGAACACAACCGATGCCACTAGTTCTATTTTATGGGATAATTATGTTACACCAATGAAAATTAAACCAT +ATTCCTCTACAATATTAGATAGATTTAGATGCACTCATATGGGTTTTGTAGCCAACACACACGGTTATTG +GTGTGGATCAATAGTTTATACTTTTAAATTTGTTAAGACTCAATTTCATTCTGGACGTTTACGCATTAGT +TTTATTCCATTTTATTATAATACGACTATATCTGCAGGAGTTCCCGATGTTTCTCGTACCCAAAAAGTAA +TCGTTGATCTGCGCACCTCTACAGAAGTCTCTTTCACTATTCCGTATGTGTCTTCACGACCTTGGATGTA +CTGTATTCGTCCTGAAGCTTCGTGGCTTGGAACCGATAATGCTTTGATGTACAACGCCGTTACGGGTATA +GTGAGAGTTGAGGTTCTTAACCAGTTGGTTGCCGCTAACAACGTGTTTCAATCTATAGACACTATTGTTG +AAGTTAGTGGTGGTCCTGATTTAACTTTTGCAGCACCAATGGCTCCCTCTTATGTTCCTTATTCTGGAGG +TTTTACTTTAGCAGATGATGCGGCAGCAAAGAAACAGCGTGAGGAGGAGTATGACAACAACATACCTCAA +ACTATTTCTAATCGTGGAAAACGTGAGGTTGAAGATGCTCGTATTGTTGCGCAAGTAATGGGTGAAGATT +TAGCTATTCAAAGAAACGATGCTCAACATGGTGTTCATCCAATGACTATAGACACTCATAAGATCGACTC +AAATTGGTCTCCGGAAGCGCATTGTATTGGTGAAAAGATTATGTCTATTCGCCAATTGATTAAGCGTTTT +GGCATGGCTTTGAACTCCTTGAATTTGATAAGTGATGCACCAAACACCTTGATAGCACCATTTTCAGTTC +AGCACCCAACTCCTGTTGTTGCCCCTGCTGAACCCATGTCCCTTTTTGAATATTATTATTTCATTTATGG +ATTTTGGAGAGGTGGCATGAGATTTAAACTTCAGGCAGTACGTACAAACTCAGCAGAAACATCAGTTAAA +ACCGACACAACTTGGACTGTAAATTTGTGGAATTCTGTACAAGATTCTTTTAATTCTCTAATTAATGTAT +TTAGTACTACTGATTACCCTATAAAATCCACAGGAGCACTTCCAGCCGGAACAAGCGGTTTTGGCAATTC +GATGACGTATATAGATCCTGAGGTTGAAGGTTTTATGGAATTTGAGATTCCATATTATAATATCTCCCAT +ATTTCTCCAGCTACAACCTATGTTCGTGGTACTGAATCTCCTATTACAATTAATAGTGTCTTGCGTGGAC +ATTTGCCACCACAAATTGTGGCTGTTGCACCACAGGGCACTATTGCCACTACAGATGTAGTGAACGCTCA +ATTTGCTCGTGCTCCTTCTGACGACTTTTCATTTATGTATCTCGTTGGTGTTCCACCACTTACCAACGTC +GCTCGTCCCTAACTCCCTTACTATTCTGGATCCTTTAAAATTTATTAGGATAGACAAAAATTAACTCTAT +ATTAGATAGTATTAGATTAAGTTTCTTTTTGGTTTTGGGTTTTATTCAGTAACTATCTGCCCTGCTTACA +CGGGTATTATTTTTAATTCTTGTCCCTTCTGGACTCTTTTATTTTGTATTTTCAAAATTTTTACTAATTT +TTAGTCAGAGTCCTTAGGGGCTACCAGGTTTTTCGCAATTTTCCTGCTTACTGACAGTAATTGCAATTTC +GAATTAAAATAATAGTTGTTTTCT diff --git a/resources/h3n2_ha/gffs/h3n2_ha.gff3 b/resources/h3n2_ha/gffs/h3n2_ha.gff3 new file mode 100644 index 00000000..3cd57f2a --- /dev/null +++ b/resources/h3n2_ha/gffs/h3n2_ha.gff3 @@ -0,0 +1,5 @@ +##gff-version 3 +##sequence-region EPI1857216 1 1718 +EPI1857216 feature gene 1 48 . + . gene_name="SigPep" +EPI1857216 feature gene 49 1035 . + . gene_name="HA1" +EPI1857216 feature gene 1036 1698 . + . gene_name="HA2" diff --git a/resources/h3n2_ha/h3n2_ha.fasta b/resources/h3n2_ha/h3n2_ha.fasta new file mode 100644 index 00000000..427694bc --- /dev/null +++ b/resources/h3n2_ha/h3n2_ha.fasta @@ -0,0 +1,23 @@ +>EPI_ISL_1563628 | A/Darwin/6/2021 | A / H3N2 | | 2021-03-16 +ATGAAGACTATCATTGCTTTGAGCAACATTCTATGTCTTGTTTTCGCTCAAAAAATACCTGGAAATGACAATAGCACGGC +AACGCTGTGCCTTGGGCACCATGCAGTACCAAACGGAACGATAGTGAAAACAATCACAAATGACCGAATTGAAGTTACTA +ATGCTACTGAGTTGGTTCAGAATTCATCAATAGGTGAAATATGCGGCAGTCCTCATCAGATCCTTGATGGAGGGAACTGC +ACACTAATAGATGCTCTATTGGGGGACCCTCAGTGTGACGGCTTTCAAAATAAGGAATGGGACCTTTTTGTTGAAAGAAG +CAGAGCCAACAGCAACTGTTACCCTTATGATGTGCCGGATTATGCCTCCCTTAGGTCACTAGTTGCCTCATCCGGCACAC +TGGAGTTTAAAAATGAAAGCTTCAATTGGACTGGAGTCAAACAAAACGGAACAAGTTCTGCGTGCATAAGGGGATCTAGT +AGTAGTTTTTTTAGTAGATTAAATTGGTTGACCAGCTTAAACAACATATATCCAGCACAGAACGTGACTATGCCAAACAA +GGAACAATTTGACAAATTGTACATTTGGGGGGTTCACCACCCGGATACGGACAAGAACCAAATCTCCCTGTTTGCTCAAT +CATCAGGAAGAATCACAGTATCTACCAAAAGAAGCCAACAAGCTGTAATCCCAAATATCGGATCTAGACCCAGAATAAGG +GATATCCCTAGCAGAATAAGCATCTATTGGACAATAGTAAAACCGGGAGACATACTTTTGATTAACAGCACAGGGAATCT +AATTGCTCCTAGGGGTTACTTCAAAATACGAAGTGGGAAAAGCTCAATAATGAGATCAGATGCACCCATTGGCAAATGTA +AGTCTGAATGCATCACTCCAAATGGAAGCATTCCCAATGACAAACCGTTCCAAAATGTAAACAGGATCACATACGGGGCC +TGTCCCAGATATGTTAAGCAAAGCACCCTGAAATTGGCAACAGGAATGCGAAATGTACCAGAGAAACAAACCAGAGGCAT +ATTTGGCGCAATAGCGGGTTTCATAGAAAATGGATGGGAGGGAATGGTGGATGGTTGGTACGGTTTCAGGCATCAAAATT +CTGAGGGAAGAGGACAAGCAGCAGATCTCAAAAGCACTCAAGCAGCAATCGATCAAATCAATGGGAAGCTGAATCGATTG +ATCGGAAAAACCAACGAGAAATTCCATCAGATTGAAAAAGAATTCTCAGAAGTAGAAGGAAGAGTTCAAGACCTTGAGAA +ATATGTTGAGGACACTAAAATAGATCTCTGGTCATACAACGCGGAGCTTCTTGTTGCCCTGGAGAACCAACATACGATTG +ACCTAACTGACTCAGAAATGAACAAACTGTTTGAAAAAACAAAGAAGCAACTGAGGGAAAATGCTGAGGATATGGGAAAT +GGTTGTTTCAAAATATACCACAAATGTGACAATGCCTGCATAGGATCAATAAGAAATGAAACTTATGACCACAATGTGTA +CAGGGATGAAGCATTAAACAACCGGTTCCAGATCAAGGGAGTTGAGCTGAAGTCAGGGTACAAAGATTGGATCCTATGGA +TTTCCTTTGCCATGTCATGTTTTTTGCTTTGTATTGCTTTGTTGGGGTTCATCATGTGGGCCTGCCAAAAGGGCAACATT +AGATGCAACATTTGCATTTGAGTGCATTAATTAAAAAC diff --git a/resources/herpes_simplex_virus_2/MK855052.1.fasta b/resources/herpes_simplex_virus_2/MK855052.1.fasta new file mode 100644 index 00000000..d2f1854b --- /dev/null +++ b/resources/herpes_simplex_virus_2/MK855052.1.fasta @@ -0,0 +1,2232 @@ + + +>MK855052.1 Human alphaherpesvirus 2 strain MS, complete genome +AGTCCCCGTCCTGCCGCGCGGGGGCGGGCGCGGGAAAAAAGCCGCGCGGGGGCGGCCGCGGGGAAGCGGG +CCCGCGGCGCGCGGGGGGAGGGGCGCCGCCCGCGGGGGAGCGGCCGGTTCCGGGGGAGGGCCGGGAGCGG +CGGGCGCGGGGAAGGGGGCGCGCGGGGCTGCCCTGCCGCCCGCCCGCCGCCGCCGCCCGCCTTCGCGCCG +GGCCCGCGGCGCGCGGGGGGAGGGGCGCCGCCCGCGGGGGAGCGGCCGGTTCCGGGGGAGGGCCGGGAGC +GGCGGGCGCGGGGAAGGGGGCGCGCGGGGCTGCCCTGCCGCCCGCCCGCCGCCGCCGCCCGCCTTCGCGC +CCCCCCCCCAAAAACACCCCCCCGGGGGTTCACTCCCCGGGGGAAAGGAGGCGGGGCGGGAGTCCCCGTC +CTGCCGCCGCCCCTTAAGAGGGCCCGCAACACGGCCCGGGCTGCGCACGCCAGCCGGGACGGGTGAGTTC +GCTAGGCAAGCACGGACTGGCGGTTACACGTGCATGCGTGCCGAGTGAACTCTCCCGCCCCGACGCGCTC +CGGCTCCGGGCCTACGCCGAGCCCAGCCGCCCGCCATGTCCCGCCGGCGTCCCCGCCGCCGGGGTCCCCG +GCGCCGGCCGCGCCCCGGCGCTCCAGCCGTGCCGCGCCCCGGCGCGCTCCCAACCGCAGACTCCCAAATG +GTCCCTGCGTACGACTCGGGAACCGCGGTCGAGAGCGCGCCGGCCGCGTCCTCGCTCCTGCGGCGCTGGC +TGCTGGTGCCCCAGGCGGACGACAGCGACGACGCGGACTACGCCGGCAACGACGACGCAGAGTGGGCGAA +CAGCCCCCCGAGCGAGGGCGGGGGGAAGGCGCCGGAGGCCCCGCACGCCGCGCCTGCCGCCGCCTGCCCC +CCGCCGCCGCCGCGCAAGGAGCGCGGGCCGCAGCGCCCCCTTCCGCCCCACCTGGCCCTACGGCTGCGCA +CCACGACGGAGTACCTGGCGCGCCTGAGCCTGCGCCGGCGGCGGCCCCCCGCGTCCCCGCCCGCGGACGC +GCCGCGCGGGAAGGTACGCCTCCCCTCCGCCCCCCTGACCCGACCCCCTGACCCGACCCCCTGACCCGAC +CCCCTGACCCGACCCCCTGACCCGACCCCCTGACCCGACCCCCTGACCCGACCCCTGACCCGACCCCTGA +CCCGACCCCCTGACCCGACCCCCTGACCCGACCCCCTGACCCCCGTGTCTCCCCGCCCGCAGGTGTGCTT +CTCGCCGCGCGTGCAGGTGCGCCATCTGGTGGCCTGGGAGACGGCCGCGCGCCTGGCCCGACGGGGGTCC +TGGGCGCGCGAGCGGGCCGACCGCGACCGGTTCCGGCGCCGCGTGGCGGCGGCCGAGGCGGTCATCGGAC +CGTGCCTGGAGCCCGAGGCCCGAGCTCGGGCCCGAGCCCGAGCCCGGGCCCACGAAGACGGCGGACCCGC +GGAGGAGGAGGAGGAGGCGGCGGCGGCGGCGCGCGGGTCCTCCGCCGCCGCGGGCCCGGGCCGTCGGGCG +GTCTAGGGTTGAACCGGCGAGGGCGGCCTCGGCCGGCGGAGCCCCGGAGCTCCGAAGGTCTGCGCGAGGC +CGCTCTCCGAAGAGACGATGGGAGCCCCGCGTATATATCCGCGAGGGCCCGGCGCCGCCCCGCCGCTCCG +CCCGCCCCAGGGGCCGGCGCCGGCCAACCGCGCGCCGCCGCGCGGGCCCGGACTCCGCCCCGGCGACCGC +CCCGCGCCGGCTTCCCGGTATGGTAATTAGAAACTTTTAATAGGCGGTCCCGGCCGCCATCCCCGCGCAT +GGTAATTAGCAACTTTTAATGGGCCGGCGTTCCCGCTCGCGGCAATTAGCAGCTTTTAACGGGCCGCCAT +TCCCGCTTATGGTAATTAAAAACGTTCGGACGGCCCCTCGCTCCCCGCGTAATTACTCCCTCGGGGTTCC +GGGTTATGCTGATTACTTTCTTGGCAGAACACGCAGAGCCTCGCGCGCCGCCGGGTGGGTGGGCTGATCG +GCCCCTATTGGTCCCCTGGGCTTCCTAGTATGCTAATGAATTTCTCCCCGGGGGCGGGCACCACTCAGGG +CCGCGCCGGCGGGGCGCCGGGGGGACTCCCATCTGCGTCGGCGGGGGGCGGCGCATGCTAATGGGGTTCT +TGGAGTACACCCGGTTGGTCCCCGGGGACGGGGCCGCCCCGAGAGGGGGGGATTCCCTCCCTCCGCCCCC +GCCGGGGCGCGCGGCTATTGGGGGAATCGTAAATGCCGCCCCTTTGGGGGAGTGGATAGGCGCCGGGTAT +AAGGCAGCCCCGTGTGACGGTCGGGCCGCATTCGCACCCCGGCACTGCGAGCGACGGAGCGGCGGCCCGG +CGGGAGGAGGAGACCCGGAGAGACAGAGACTAAAACCCGGCAAGAGAGAGACCGCGGGCCGCCGTCTCGA +GTCTACCCTACCCCGGCTCATGGAACCCCGGCCCGGCACGAGCTCCCGGGCGGACCCCGGCCCCGAGCGG +CCGCCGCGGCAGACCCCCGGCACGGTGAGAGGGCGACCCCCGGGTCTCAGGCCCCCCCTTTTCCCCGGAC +CACCCGGCTGCGGGTTGGGGGTGGTCGCGGGCGGTGGGCTCGGGGGCGGGGACGCTTGACGGGGCCGACC +CCCGGCCCGCTTAAGCGGTCGGGGGACCCCCGTGGGCCGTGCGCCGCCCCCCGACCCTCTGGGGGGGCGA +GGGAGGCAGGGAGGAGCCCGAGAGCGGGGGACAGGGGGGGAGACGAGGGGTCGGAATCCAAAGGACGCAG +ACCACCTTTGGTTACGGACCCCTTTCTCCCCCCCTTCCGAACAAAAAGCAGCGGGCGGGGGGCCGGGGTG +AGGGAGGGACACGGGGGACACGGCACGGGGGTCCCGCCTCACGCCCCGCGCCCTCTAAATCCCCCCCGTT +TCTTTGTCAAGCAGCCCGCCGCCCCGCACGCCTGGGGGATGCTCAACGACATGCAGTGGCTCGCCAGCAG +CGACTCGGAGGAGGAGACCGAGGTGGGAATCTCTGACGACGACCTTCACCGCGACTCCACCTCCGAGGCG +GGCAGCACGGACACGGAGATGTTCGAGGCGGGCCTGATGGACGCGGCCACGCCCCCGGCCCGGCCCCCGG +CCGAGCGCCAGGGCAGCCCCACGCCCGCCGACGCGCAGGGATCCTGCGGGGGTGGGCCCGTGGGTGAGGA +GGAAGCGGAAGCGGGAGGGGGGGGCGACGTGTGCGCCGTGTGCACGGACGAGATCGCCCCGCCCCTGCGC +TGCCAGAGTTTTCCCTGCCTGCACCCCTTCTGCATCCCGTGCATGAAGACCTGGATTCCGTTGCGCAACA +CGTGTCCCCTGTGCAACACCCCGGTGGCGTACCTGATAGTGGGCGTGACCGCCAGCGGGTCGTTCAGCAC +CATCCCGATAGTGAACGACCCCCGGACCCGCGTGGAGGCCGAGGCGGCCGTGCGGTCCGGCACGGCCGTG +GACTTTATCTGGACGGGCAACCCGCGGACGGCCCCGCGCTCCCTGTCGCTGGGGGGACACACGGTCCGCG +CCCTGTCGCCCACCCCCCCGTGGCCCGGCACGGACGACGAGGACGATGACCTGGCCGACGGTGAGGGCGG +GCGGGGGTCGGGCGGGGGTCGGGCACTAACCGGGGGTCGGGCGGGGGTCGGGCACTAACCGGGGGTCGGG +CGGGGGTCGGGCACTAACCGGGGGTCGGGCGGGGGTCGGGCACTAACCGGGGGTCGGGCACTAACCGGGG +GTCGGGCACTAACCGGGGGTCGGGCACTAACCGGGGGTCGGGCACTAACCGGGGGTCGGGCGGGGGTCGG +GCACTAACCGGGGGTTCCCGTCTCTGTCTCCCTCTGCAGCGGACTACGTCCCGCCCGCCCCCCGAAGAGC +GCCCCGGCGCGGGGGCGGCGGTGCGGGGGCGACCCGCGGAACCTCCCAGCCCGCCGCGACCCGACCGGCG +CCCCCTGGCGCCCCGCGGAGCAGCAGCAGCGGCGGCGCCCCGTTGCGGGCGGGGGTGGGATCTGGGTCTG +GGGGCGGCCCTGCCGTCGCGGCCGTCGTGCCGAGAGTGGCCTCTCTTCCCCCTGCGGCCGGCGGGGGGCG +CGCGCAGGCGCGGCGGGTGGGCGAAGACGCCGCGGCGGCGGAGGGCAGGACGCCCCCCGCGAGACAGCCC +CGCGCGGCCCAGGAGCCCCCCATAGTCATCAGCGACTCTCCCCCGCCGTCTCCGCGCCGCCCCGCGGGCC +CCGGGCCGCTCTCCTTTTTCTCCTCCTCCTCCGCGCAGGTGTCCTCGGGCCCCGGGGGGGGAGGTCTGCC +ACAGTCGTCGGGGCGCGCGGCGCGCCCCCGCGCGGCCGTCGCCCCGCGCGTCCGGAGTCCGCCCCGCGCC +GCCGCCGCCCCCGTGGTGTCTGCGAGCGCGGACGCGGCCGGGCCCGCGCCGCCCGCCGTGCCGGTGGACG +CGCACCGCGCGCCCCGGTCGCGCATGACCCAGGCTCAGACCGACACCCAAGCACAGAGTCTGGGCCGGGC +AGGCGCGACCGACGCGCGCGGGTCGGGAGGGCCGGGCGCGGAGGGAGGACCCGGGGTCCCCCGCGGCACC +AACACCCCCGGTGCCGCCCCCCACGCCGCGGAGGGGGCGGCGGCCCGCCCCCGGAAGAGGCGCGGGTCGG +ACTCGGGCCCTGCGGCCTCGTCCTCCGCCTCTTCCTCCGCCGCCCCGCGCTCGCCCCTCGCCCCCCAGGG +GGTGGGGGCCAAGAGGGCGGCGCCGCGCCGGGCCCCGGACTCGGACTCGGGCGACCGCGGCCACGGGCCG +CTCGCCCCGGCGTCCGCGGGCGCCGCGCCCCCGTCGGCGTCTCCGTCGTCCCAGGCCGCGGTCGCCGCCG +CCGCCTCCTCTTCCTCCTCCTCCTCCTCCTCCGCCTCTTCCTCTGCGGGCGGGGCTGGTGGGAGCGTCGC +GTCCGCGTCCGGCGCTGGGGAGAGACGAGAAACCTCCCTCGGCCCCCGCGCTGCTGCGCCGCGGGGGCCG +AGGAAGTGTGCCAGGAAGACGCGCCACGCGGAGGGCGGCCCCGAGCCCGGGGCCCGCGACCCGGCGCCCG +GCCTCACGCGCTACCTGCCCATCGCGGGGGCCTCGAGCGTCGTGGCCCTGGCGCCTTACGTGAACAAGAC +GGTCACGGGGGACTGCCTGCCCATCCTGGACATGGAGACGGGCCACATAGGGGCCTACGTGGTCCTCGTG +GACCAGACGGGGAACGTGGCGGACCTGCTGCGGGCCGCGGCCCCCGCGTGGAGCCGCCGCACCCTGCTCC +CCGAGCACGCGCGCAACTGCGTGAGGCCCCCCGACTACCCGACGCCCCCCGCGTCGGAGTGGAACAGCCT +CTGGATGACCCCGGTGGGCAACATGCTCTTTGACCAGGGCACCCTGGTGGGCGCGCTGGACTTCCACGGC +CTCCGGTCGCGCCACCCGTGGTCTCGGGAGCAGGGCGCGCCCGCGCCGGCCGGCGACGCCCCCGCGGGCC +ACGGGGAGTAGGGGGAGCTAACACTCGGCTTGCTGCCCAAAGGGAAGCCGCCCCCCACCGGACCACCGGC +CGAGGCGCCTCGGGGGCAGGGGGAGGTGGGGGGGAAAGACGGGGAGGAGACAGGAAGTGGGGGTGGGAGT +GGGGGGGGGGGACGGACACGGCCCCGAACAGCAACACACACCAGCATTTTGTTATGGACTTTCTGGCCTT +GTTGAAAACTTGAGGGAAAAAAACTTTATATTTATAAAAATTTTACAATAAAGTTTTGTGATGCTTTTGA +CACACTTTGTTGTTGGCCTTTGATGCAGCTCCCCCGCGCAGGGGGGCCGGGGATGGGGGGGGAAAGGGAG +GAGGAGGAGGGGGGGCGGGCACGAGAAGCCGCCCCCACCCCCGAGGCCTGTTGGTCTTTATCATAGAACA +GAGCCGGGGCCCGGCCTGCGTTCTGGCTCCCTGTCTTGGTGGGTGGGCGGGCTGGCTGGCGGGTAAAAAA +AGAGTGTGTCCGTGTTGACAGGGAGGGGGGCCCGATCGTGCAGAGCACGCACGTCTGGCCGGCCAGACCC +TGGGGGTGGTGGGCAGGAGTGGGAGGGCGCCTGGCTCGGGGAGGGAGGAGGGGGAGGGGTCAGCCGCACC +ACCGGCGCGAAGCCAGGGGCCAGGGAACTTTGATAGAGAGGGGGGGAAAGTGGGGCGGGGGCGAGGGCGG +TTGAATCACAACGCATGCACGCCCTCTGCCCCCGGGGACGGGTGGGAGGAAGGAGGAGGAGGAGGGAGAA +GAGAAGACCCGAGGCATGCACCCGCACTTACGCCCGTGCCCACCCCCGCCCCGGCGCCCACCCCGCCCGC +ACACCTGCCCGCCACGCCCGCCCCTCCTCACCCTGGCTGTGAGAAAGGAGGAGGAGCAGGAAGAGGAGAC +CCGAGGCATGCAACCGCACTCACCCCACCCCGCCCGCACACCTGCCCGCCACGCCCGCCCCTCCTTACCC +TGGCTGCGGGGAGACTCCCATCGGGGCGAGGGGGCTCGCGCGTTCGCAACACCACACCACACCACACGGC +CCACCACAACACGGCCCACCACGACACAACACGACACGACGCGTTTTGCGGGGCATGCAAGTCGACACAC +CGCGCGCGTGCCTACCTTTCCCTAGCGGCCCCGGCCCCCGGCCCGTTTCCTTCCGCCACCACTACCACCA +CCACCCCCCCGCCCGCGCCCACGCGGTAGAGGAAGGGGACGGGCGCCACACCCACGGCTGTGGCCGGGCA +CGCGCCTTTGGGGTTGTTGGGGGGGGGGGGTGACCGGCGCGTGGGGGCGGTGGGCGTATGGGCCCGACCC +GCGCCTGCCCCCCCCCCTGGGAACGACGCCCCCGGACGACACCACGGGGGGGGGGGAAACGGGGGTGGGT +GGAAGGGAAGAGGAAGGAGAAAGGGGGGGTGGATCCGAACACGCCGGATCCGCGAAAATAATAACAAAAC +AAACAAAAACAGAAACAAAAACAAAAACACCTAGAAAAAAAGGATACGGGTTGGCTCGCGGGCGGTGCGG +CTGACCTGCCTGCCCTTTCTGGGACCCCCGCCTCGTGTTTCTTGAAAGGGGGAGGAAGAACAGTTTTCCC +CCAACCCCTGCTCTCTTCTCTCTTCCGCCCGCCCCCCCCCCCCCTCTCCCGCCGCCTCAGCAGAAGCTCA +CCTGTACGACCCTAAACCTACCTGCGAGAACGCGCGGCGTTCGAGGGGCGCGCTGTCTCACACGAGACAC +ACGCAGGCGCGCCCCCCCCCGGAGCCCGGGTCCCCCGGCGGACGGCTCACGCGGCGCGGCGTCTCGGTGG +GACGCGGGCAGAGGGCGGCGGCGGCGGCGGCGGGGGGGGGGGAAATGTGAGGAGAGCGAGACAGCGAGAC +AGAGAGAGAGAGAAGGAAGAGGGAAGGGGCGCGGCGGGACGGGGGAAGACGAGGAGAAGGGAAGGGGCGA +GGGTCGGGCCCGGGAGCGGGGCGGCCGGGAGGGAGAAGAAACGGAACGCGGAAACGCCGCCGGCGCGGCC +CGGGGCCCCGGGGCCCCCGCGCTCCGCCGGGGGCCCGGGCCGGACCGCCGGGCGGGGGACGCCTTCCGAC +CGGCGCCGGGCGGCTACCCGGGACCCCCGGCCGGGAATCGAAAAAAGCCTCCGGGGGCCCCTTTCGCGCC +TTTCGCGAACGCGCGGCGCCGGAGGGGGCGGCCGCCGAGGTGCGGGGGCCCCTCCGACCGGGGCGCACCT +CGGCGGCCAAGCCCCGGCCCGCCCGGGGGTCCCCGAGGCAGAGGCGGACCCTCGGAGGCGCGGAAGAAGA +CGGGAGGCGGGGGAAAAAAGGGGGAAGAGAGGGGGAGGTAGGGAGGGGAGAGGCGAAGGGCGCGCCGGTG +CGCGGAGCAGCCTTCCTTCTCCGGAGTCCCTCTCGATCGGCGGCGGGCCCCTGTGTTCGTTGCTGCCGCG +CCCCCGGTTTTATAAAGACAGGGATGACGCAGCAGAAATGCCCACAGCAACACGCGGGCGGGGCTCGGGC +TCTCCGGCGGCTTAATGGATCTCCGGGCACGGCGCCCGCAACCGCAGAGCACTCAGCTGGCGCGCGGCAC +GCGGGCGTGGGAGTGCTTAATGGAAGGGCGTGGGGCCGGCCGCCGGATGCCCGCGGGGGCCTAATGCGGC +GGGAGGCGTGGGCCGCTGGCGCCGCGGCCCGTCTGCTGGCCCGCGGCCCGTCTGCTGGCCCGCGGCCACG +TAAACAATGACACAGGGGTTCTCTCCGCCGCGGCCGGCGCGGGGCGTTGCCGGCCCGGCCCGGCCCCGGA +GCCCGCGGCGCTGCTCGGCTGCGGCCGCGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCTC +CGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGC +TCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGCACTCTGCCCGGCTCGCCCCGTCCCCCCTC +TTGCTGCTTTTCCGCGCGCCTCTCTTTCCCGTTGCTTTCCCTCTCCCCCCCCCCCCCTCTCTCTCTCTCT +CTCCGCCATCCTCCCGCCCGGCCGCCCACTCCCCGCTCGGCCTCTCCGGCTGCGGTGCTTGGGTCTCCTT +CGTCGGGCGGCGGGGGGGGGGGGGCGTCGGGACTCGCGGAGGGCCGGAGAATGGAAGGCGAGGGGATGCA +GGAGGAGGATCGGGACTCCCCATCTTCTGCCCTTCCATCCTCCGTTTTTCCGCTTTCCACCGCCGCCGCC +ACCACCCCCCCTTCCTTCGCCCGCCCGCCTCGCCCCGGACCCCTCCCCCCCGTGTTCCCCCCATCGTTCA +CCACCACGCCCCCCACCGCGCCTTGGCTGTTTGGGGGGTGGCGGCGGTGGTCGGCGTGCTGCCGGAGGCT +GCGGGCGCGGGGTAGGTGGGTGGGCGGGTGGTGGGGGGGGGCCCGGCTGCGTCTCGCCGCGATCCCGCCG +GTGGGGCGCGGCGGCGGTCGGGGTGGGGGGAGAGTGTCGTGGGTGTGTTTTCGTGTCCCCCACCACCACT +CCCACCCCGACCGCCGCCGCGCCCGCGTTTCTGCCGCCCGCGCGCTCCTGTGTGGACCCCGGGGTGGGCG +GCGGGGGGGTGCCGTGGGTGTGGCGGCGGGGCGCGGGCCGGGGCCGGGGCTCGCTGGTCCGCCGAAGTAA +AGAAAAGATCGCCACCGTGTGTTCGTCTGTGTGTTCTGCGCGGCGCCGGGGCCCCCCTGCCGGGCGGGGC +GGTGGGGCGGGGCCGGGGTCGCGGCGGGGAAGGAAGGAAAGGCCCCGGAAGCGCCGGGAGGGGGCGCCGG +CGCGCGGCGGCCGGGCGGGGGCGCGCGGCGGCCGGGCGGGGGCGCGCGGCGGCCGGGCGGGGGCGCGCGG +CGGCCGGGCGGGGGCGCGCGGCGGCCGGGCGGGGGCGCGCTTTCCCCGCGTCGCCCCTCGGGTTCCCAAG +ACCTATCACGTGTGCGCAGGGGAGGGGAGGACGCGGGGGAGGGGAGGACGCGGGGGAGGGGAGGACGCGG +GGGAGGGGAGGACGCGGGGGAGGGGAGGACGCGGGGGATATATAAAGCGGTAGAAAGCGCGGGAATGGGC +ATATTGGACCCGCGTGATTCGGTTGCTCGCGGTTGTCTTGTTTGGACGTTTTTTATGCGGGAACAAGGGG +GCTTACCGGCTACACTGTCCGCTCGCTATGGGGTTCGTCTGTCTGTTTGGGCTTGTCGTTATGGGAGCCT +GGGGGGCGTGGGGTGGGTCACAGGCAACCGAATATGTTCTTCGTAGTGTTATTGCCAAAGAGGTGGGGGA +CATACTAAGAGTGCCTTGCATGCGGACCCCCGCGGACGATGTTTCTTGGCGCTACGAGGCCCCGTCCGTT +ATTGACTATGCCCGCATAGACGGAATATTTCTTCGCTATCACTGCCCGGGGTTGGACACGTTTTTGTGGG +ATAGGCACGCCCAGAGGGCGTATCTGGTTAACCCCTTTCTCTTTGCGGCGGGATTTTTGGAGGACTTGAG +TCACTCTGTGTTTCCGGCCGACACCCAGGAAACAACGACGCGCCGGGCCCTTTATAAAGAGATACGCGAT +GCGTTGGGCAGTCGAAAACAGGCCGTCAGCCACGCACCCGTCAGGGCCGGGTGTGTAAACTTTGACTACT +CACGCACTCGCCGCTGCGTCGGGCGACGCGATTTACGGCCTGCCAACACCACGTCAACGTGGGAACCGCC +TGTGTCGTCGGACGATGAAGCGAGCTCGCAGTCGAAGCCCCTCGCCACCCAGCCGCCCGTCCTCGCCCTT +TCGAACGCCCCCCCACGGCGGGTCTCCCCGACGCGAGGTCGGCGCCGGCATACTCGCCTCCGACGCAACT +AGCCACGTCTGCATCGCAAGCCACCCTGGGTCGGGAGCAGGACAGCCGACCCGTCTAGCGGCCGGGTCGG +CTGTCCAGCGTCGTCGCCCTAGAGGCTGTCCGCCGGGCGTGATGTTTTCCGCATCTACGACCCCCGAACA +GCCCCTGGGGCTGTCGGGCGATGCGACGCCGCCCCTGCCGACTTCCGTGCCCCTGGACTGGGCCGCGTTT +CGGCGCGCGTTTCTGATCGACGACGCCTGGCGGCCCCTGTTGGAGCCGGAGCTCGCGAACCCCCTAACCG +CGCGCCTCCTCGCGGAGTATGACCGTCGGTGCCAGACCGAAGAGGTGCTGCCGCCGCGGGAGGATGTGTT +CTCCTGGACGCGGTATTGTACCCCCGACGACGTGCGCGTGGTTATCATCGGGCAGGACCCGTACCACCAT +CCCGGCCAGGCGCACGGCCTGGCGTTTAGCGTGCGTGCGGATGTGCCGGTGCCTCCGAGTCTACGGAACG +TGCTGGCGGCGGTTAAAAATTGTTACCCCGACGCGCGCATGAGCGGCCGCGGCTGCCTGGAAAAGTGGGC +TCGCGACGGCGTGCTGTTGTTGAACACGACCCTGACCGTCAAGCGCGGGGCGGCGGCGTCCCACTCCAAG +CTTGGATGGGACCGCTTTGTGGGCGGGGTGGTCCGACGGCTGGCCGCGCGCCGCCCGGGCCTGGTCTTTA +TGCTCTGGGGCGCCCATGCCCAGAACGCGATCAGGCCCGACCCTCGCCAACACTACGTCCTCAAGTTTTC +TCACCCGTCGCCCCTCTCCAAGGTCCCGTTTGGGACGTGCCAGCATTTCCTCGCCGCGAATCGCTACCTC +GAAACCCGGGACATTATGCCTATCGACTGGTCGGTATAAGATGCCGACATCCGGGGTCTTGATTTACGAG +GGGGCAATTAATAAAGACTGTTGATGGTTAAATCTCGGGTCTCATACCGGTCCGTGATGTCGGGCGTGGG +GGAAGAGAGGGTCCCCTCTGCGTTTACTATCCTTGCCTCGTGGGGCTGGACGTTTGCACCCCAGAACCAT +GATCCTGGCGCGTCGCCGAATACGACGCCCATAGAGTCGATTGCGGGGACCGCACCGGACGCGCACGTGG +GGCCTCTCGACGGAGAGCCGGACCGGGATGCGATCTCCCCGCTTACGTCGAGCGTGGCCGGCGACCCGCC +GGGGGCGGACGGCCCCTACGTCACCTTTGATACTCTGTTTATGGTATCTTCGATCGACGAACTGGGGCGC +CGCCAGCTCACGGATACGATCCGTAAGGACCTGCGGCTGTCGCTGGCCAAGTTCAGCATCGCGTGTACCA +AGACCTCGTCGTTTTCGGGGACGGCCGCGCGCCAGCGCAAGCGCGGAGCACCGCCGCAACGCACATGCGT +ACCACGCAGCAACAAGAGCCTCCAGATGTTCGTTTTGTGCAAGCGCGCCAACGCCGCGCAGGTGCGCGAG +CAGCTGCGGGCGGTTATTCGGTCGCGCAAGCCGCGCAAGTATTACACGCGGTCCTCGGATGGGCGGCTCT +GCCCGGCCGTCCCCGTGTTTGTACACGAGTTTGTTTCGTCCGAACCCATGCGCCTCCATCGAGATAACGT +CATGCTGTCTACGGAACCAGACTAAGCACCCCCGCCGTCCCCTTTCTTTTCCCCCTACCCTTCCCCCCGT +TACTGGTGTGTTGTGACGTTTCAATAAATAACACGTAGCTTATTTTGTTGGATGATGGATTGATTGATTT +TATTGACCGTTCGTTCGCCCGGCGGTGCCGTCGCCGCGCGCAGAGGGAATATGCAAGCGGGCGGGGTGGG +GAGGAAAGAAGGTTTCAGGTTCCGGGGGTTGGGTCTGCGTCGTCCAGGGTGGGGCTGATCTGAATTTCCC +GCAGAACCTCGACCAGTAGGTCTGTTGTGTTTGCTGGGAACTCGCCCGCCGTTGGGGATACGGGGGCGGG +GGGTGTGGTCGGGCGGACGTCCGGGGGTGCGTTATCGCACCCCCGCGCCGCCTCGGGGGCCGTCCCGTAG +ATCGTTGCGGTGATGTAGATGGTGTCCGGGGTCCACACCACCGTCAGGATGCCGGCCGTCGCACTCCGGA +CGCTTTCGCCGTGCGATGAGCTGACCCAGGAGTCAAAGGGGTACGCGTACATATGGGCGTCCCACCAGCG +CTCCAGCCTCTGGGTACTAGCGCGTCCTATAAAGCGGTATGCGCAAAATTCGGCACGACAGTCGATAATC +ACCAGCAGCCCGATGGGGGTGTGTTGTATCACCACGCCTCCGCGGGGCAGGCGGTCCTGGCGCGCTCGAC +CCCGCGTCAGAACCGCGCGCGTCCCTGACTCAAACACGTGCACCACCTGTGCCGCGTCCGGCAGCGCGCT +CGTTAGCGACGCCCTGGGGTGATGTAGGCTGTACGCGATGGTCGTCTGGGGGTTCCCCATGTCTCGGGGG +GGTGGGGGTGAATGTCACCCGGCCCGGGTGCGGTGGGAACGCGAGGGAATGGAGGGTTAATAGACAATGA +CCACATTCGGATCGCGTAGAGCAGATAGTATGTGCTCGCTAATGACGTCATCGCGTTCGTGGCGCTCCCG +GAGCGGGTTTAGATTCATGTGCAGGAACTCGGATGAGGTGGTGCGGGACATGGCTACGTACGCGCTGTTT +AGGCGCAGGTTTCCGGGCGTGAAGCATATGGCGACCTTGTCCAGACTGAGCCCCTGGGAGCGCGTGATGG +TCATCGCGAGTTTGGAGCTGATGCCGTAGTCGGCGTTGATGGCCATGGCCAGCTCCGTGGAGTCGATCGA 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+TACGGGGCGATGTTCTCCTTGAAGACCACCGCGATGCCCTCCGTGTAGTTCTGCCCCTCCGGGCGCGTCG +GGCAGCGGCGCGGCTGTTCAAACTGCACCACCGTGGCGCCCGTCGGGGGCGGGCACACGTAAAACTGGGC +ATCGGCGTTCTCGACCTTGATTTCCCGCAGGTGCGCGCGCAGCGTGGCGTGGCCGGCGGCGACGGTCGCG +TTGGCGTCGGGGGGCGGGGTCGCCTCGGGCCGCTTGGGCGGCTTTTTGGTTTTCCGCTTCCGGGCCTTGG +TGGTCGCGGGGCTCGGGACGGGGGGCGGCTGGGGGGCGGGACCCCCGTTCGCCGCGACGGTCGCGGCCAC +GCCGCCCGAGGCGCGGGGGGCCGCCGGGGCCGCCGACGCCACCGCGGCCACCAGCGCCCCCACGACCAGC +GCGCAAATCAAGCCCCCCCCGCGCATGGCGGGCCTACGGGGGCGCGTCGCTCCCGCCGCCCGCTAGTCTG +GGGGCGAGGTGCTGCAGGACCGAGTAGAGGATGGAAAAAACGTCTCGGTCGTAAACCACGACCGAGCGGG +GTCCGATGCAGCCGTCGGGGCCGCTCTCGACGATGGCCACCAGCGGACAGTCGGAGTTGTACGTGAGGTA +CACGCCCGGCGGGTAGCGGTACAGACCTTCGGAGGTCGGGCGGCTGCAGTCGGGGCGGCGCAACTCAAGC +TCCCCGCACCGGTAGACCGACGCAAAGAGTGTGGTGGCGATAATGAGCTCGCGAATATATCGCCAGGCGG +CGCGCTGGGTGGGCGTGATTCCGGAAACACCGTCAAAACAGTAGAACTTTTGAAACTCGCTGACGGCCCA +ATCAGCGCCCGAACCCCCCGCGCCCATGATGAAGCGGGCGAGTTCCTCCTTGAGGTGCGGCAGGAGCCCC 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+TGGGACATCGGCCAGAGCCACTTTCAGAAGCGCAGCAAGATCAAGGTGAACGGGATGGTGAACATCGACA +TGTACGGCATCATCACCGACAAGGTCAAACTCTCCAGCTACAAGCTGAACGCCGTCGCCGAGGCCGTCTT +GAAGGACAAGAAGAAGGATCTGAGCTACCGCGACATCCCCGCCTACTACGCCTCCGGGCCCGCGCAGCGC +GGGGTGATCGGCGAGTATTGTGTGCAGGACTCGCTGCTGGTCGGGCAGCTGTTCTTCAAGTTTCTGCCGC +ACCTGGAGCTTTCCGCCGTCGCGCGCCTGGCGGGCATCAACATCACCCGCACCATCTACGACGGCCAGCA +GATCCGCGTCTTCACGTGCCTCCTGCGCCTTGCGGGCCAGAAGGGCTTCATCCTGCCGGACACCCAGGGG +CGGTTTCGGGGCCTCGACAAGGAGGCGCCCAAGCGCCCGGCCGTGCCTCGGGGGGAAGGGGAGCGGCCGG +GGGACGGGAACGGGGACGAGGATAAGGACGACGACGAGGACGAGGACGGGGACGAGCGCGAGGAGGTCGC +GCGCGAGACCGGGGGCCGGCACGTTGGGTACCAGGGGGCCCGGGTCCTCGACCCCACCTCCGGGTTTCAC +GTCGACCCCGTGGTGGTGTTTGACTTTGCCAGCCTGTACCCCAGCATCATCCAGGCCCACAACCTGTGCT +TCAGTACGCTCTCCCTGCGGCCCGAGGCCGTCGCGCACCTGGAGGCGGACCGGGACTACCTGGAGATCGA +GGTGGGGGGCCGACGGCTGTTCTTCGTGAAGGCCCACGTACGCGAGAGCCTGCTGAGCATCCTGCTGCGC +GACTGGCTGGCCATGCGAAAGCAGATCCGCTCGCGGATCCCCCAGAGCACCCCCGAGGAGGCCGTCCTCC 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+GCTGGCCGCCCGACAGCTCCACCTCGCCGAGCGCCTGCTTGGCGGCCGACGCGTAGTGCCGGATGTAGTC +GTAGTGCGGGTCGCTGGCGAGCCCGTCTACGATCAGGCTCTCGGGGACGGTGTTATGGTGCCGCGCCGCC +AGCCGGACGCTGCGATCGGCGCCGGTCAGAAACGCCGGCTGCAGGTCGTCGGCGCGCTGCCGCAGGACGC +CCACGGCCGCGCTGAGGAGCCCCTCCGGGGTGGGGAGCAGACACCCGGCGAAGATGCGCCGCTCGGGGAC +GCCCGCGTTGGCGCCGCGGATGAGGTTGGCCGGCGTCAGGCACCGCGCCAGCCGCAGGGAGCTCGCGCCG +CGCGCCCGGCGTTGCATGGCGGAGACCGTTCGGTCGGGGGCCCCGCCGGTCGGAGGTATGCCGCGTCCCG +GGATATAGGGTTGCTTTTTATGGGGAGGCGCCTATGGGCGTGGCGGGCCGCCCAGCCCGGTCGCGCGCCT +CCCGGACACGTGCGCCCGGAGGGCGGCGGTCTCCTCGTCGCCCATGAGCAGTTTCCGAAACTGCGCCATG +ATGTCCACGACGCGGACCCGCGGCCCCAGCACGGACTCGCTATTCAGGGGGGCGGGGGGGAAGGCCGCCA +GGTCTTCGAGCAGGAAGGCGGGGTCTGCCGTCCCGCTCACGGGCGCCCGGGGCGCCGAGGACGCGGGGCG +AAGGTCCACGTGTTCCGCGGCGGCGCGCACGTCCGCCCAAAATTTGGCGGGGGTGGTCCGCGCGTACAGG +GGCTGGGTCGCGCGGAGGACGCACGCGTAGCGCAGGGGGGTGTACGTGCCCACCTCGGGGGCCGTCGACC +CGCCGTCAAACGCGGCCAGGGCCACGCACGCGACCACCGTGTCGGCCAGGCCCAGCAGCCGCTGCAGGAT +GAGCCCCGTCGCCAGCACGGCGCGCGCGGCCGCCGCGTCGTCCCTGCGCCGGCGCGCGTCCCCGCAGGCC +AGGGCGTATTTCAGGGTAACGGTCGCCAGGGCCGTGTGCAGCGCGTACACGGCCGCGCCCAGCACGGCGT +TCAGCCCGCTGGTGGCGAGCAGGCGGCGCGCCGCGGTGTCGCCCAGCGCCTCGTGCTCGGCCGCCACGAC +CCCGGGGCTGCCCAGGGGCAGGGCGCGAAACAGCGCCTCCTGCTCCACGTCCGCAAACGCGGGGTGGGCG +GAGTGCGGGTGCAGGCGCGCCCCCACGACCACCGAGAGCCACTGGACCGTCTGCTCCGCCAGGACCGCCA +GCACGTCCAGGACGCGCCCCGCAAACGCGGCCTCCCGCGGGAGCACGCATTTGACGGCGCCGGGGTTGAA +GCGGGCGAGCAGAGCCCCGGTGGCGATGTACGTCATGCGCCCCGCGTAGCGGGCGGCCACGCGACAGTCG +CGCCCCAGGAGCGCGCGCACCCCGGGCCAGTACAGCAGGGACCCCAGCGAACTGCGAAAGACCGCGGCGT +CGGGGCCGGGGTGGGGGGGCGCGGCCCCTCCCGCGCTGAGCAGCGGCACGGCGGCGGCCCCCACGGGCCG +CAACGCCGTGAGGCTCGCGAACTGCCGTCGGAGCTCGGCCGCCCTGTCGTCGAGCTCCGAGCCGCGCCCC +TCCGTGTGCAGGCGCGTCCCGCAGACCCACCCGTTGATCGCCACCCGCACGATGGCGTCCACCAGAAAGC +CCATCGCGCGGGAGGGGCTGGTTTTTGCCCGCCGATCCGTCAGGTCGAGGATCGCGTCGCCCGTGACGTA +CCAGGCCAGCGCCTCGCCCTGCTGCAGCGTCTGGCGGAAAAACACCTTTGGGTCGGCCGGGGAGGCAAAG +TGCATGACCCCCACGCGCGACAGCCCGAACGCGCTATCCGGACACGGGTAGAACCCGGCCGGATGTCCCA +GGGCCAGGGCCGAGCGCACGGACTCGTCCCACGCGGCGACTCGGGGGGTCAGGCGGTCCAGGGGGAATGC +CGCCTGCAGCTCCGGGCCCGACACGCGGCCCGCGAGAATCTCGACCGTCGCGGGAGGCCGCGCCCCGGCG +CCGTCATCGTGCGCGACGGCGGCGGGGTAGTCGTCCTCCTCGTAGCTGAGCTCGTCCAGGAACAGCGGCG +AGGGCACCACCCGCGAACCGCCCACCCGCCCCAAAACGTCGCGTGGGTCCATCGGGCCCAGGTAGCCTCC +CCGCGGGGCCCGCGTGATGGCGCTGTCCCGGCGTCCGCGAACGGACTGGCTCCTGGCCGTAACGGACCTG +GGGCGCGGAAAGGACGCCCGGCGGGGGGGCGCCGCCGCCCGGGCCTCGGACGCGCGTCGGGACCCGGGGT +GACCGCGGGCCTCCCGGCGACGGCGCGGGGGCGGCTCTTCGCTCGCCATCTCCCCCGCGGCCTCGACCTC +GCTGTCGTCGTCCACGTTAAACACCGCCCGCAGGTACCCCATTAACCCGACTCCACCGCCCTCGGGCTCG +TCCTCCACGGGCGAGTCGGCGCGATGCGCGGACGGGGCATGGGACCGGGTGGAGGCGCGCCTCCGGCGTA +CGGCATGCCCGCGCACGGACATGGTGGCCGGAGGCCCGATTTTTTACACACGCCCTCCCCGCAGACGGAC +GAGGAAAGGGGTGGTGCGAGGGGGGGAGGCCCAAACGGGGAGGTGGGGGGTAGGGGGCGGTCCCAGGGAG +CGGGGGGTAGGAACCGGCACGACGGGAACAGAGAAACGCGACCGCTCCAACAAGGGTGGGGGGGTGGGCC +TCGTCCCCACGCAGACCCGCGGGCAAATGCGAGAACGGGACCCGCGCGCCTGCCTTTATACGCGGACCCC +AGCACCACGAGCCGTTCTGTGACGCGAATCTACACGACCGCGGGCTCGTAGGCGCGACTAACGCCCAACC +CAACGGCACACACCCCCCACCCCGCGCGTAACCCCATTTCTTTCATGGTCCCGTAATAAACAGCCAACGC +ACGCCGCGTATGATGAGTTGCTTGCCAATGTTTATTGCTGTGGTTGCGAACCTTCTATCGCGATACAGAC +GGAGGTGAGGCGGGGCGGTGGTGGGGGGGGGGGCGCGCCGCCCGGTCGCACATCCTACCCCCCAAAGTCG +TCAATGCCCATGGCATCGGTAAACATCTGTTCAAACTCAAAATCGTCCACGTCCAAAGCCCCATACGAGA +CGGGGTCGTGGGTCATTCCCGGGGAGGGGGACTCCACGTCCCCCAGCATCTCCAAGTCGAAGTCGTCCAG +GGCGTCGGCGGGCGTCATATCCACCTCCTCGCCGTCCAGGCGGAGTTCGTCTCCCAGGCTGACGTCGGTA +ATGGGGGCGGTGGTGGACAGTCTGCGGGGGCGTTGTCCCGCGGAGAGAAACGACATGCGCGGCGCCACCA +GCCCGGCCTCCGCGGGAGCGTCATCGTCGTCCGGGAGGTCGAGCAGGCCCTCGATTGTCGATCCGTAATT +GTTTCTGGTCCGCCCGCGGCTATACGCGTGCTCCCGCATGACGGACTCGCCCTCCGAGGTCGCGACGCTG +GAGTACGAGTCCAACTTGGCCCGGATCAGCAGCATAAAGTACCCAGAGGAGCGGGCCTGGTTGCCCTGCA +GGACGGGCGGGGTCGTGAGGGGCGCCCCGGGTTCCTCCGCCGCCGCACTTCGCACCAGCGGGAGGTTCAG +GTGCTCGCGAATGTGGTTTAGCTCCCGCAGTCGCCGGGCCTCCACGGGAACTCCCCGCACGGTGAGCGAT +CCGTTGATAAACATCAGGGGCTGAAACAGACACGCCAACTGGCGCCAGCTCTCCAGGTCGCAGCAGAGGC +CGTCGAACAGATCGGGCCGCATCATCTGCTCGGCGTACGCGGCCCATAGGATCTCGCGGCTCAGAAAGAG +GTATAGATGCAGAAACAGGACGCGCGCCAGGCGCGCGGTCTCGCGGTAGTACCTGTCCGCGATCGTGGTG +CGCAGCATCTCCCGCAGGTCGCGGTTGCGGCCCCGCATGTGTGCCTGGCGGTGTAGCTGCCGAACGCTGG +CGCGCAGGTACCGGTACAGGGCCGAGCAAAAATTTGCCAACACGGTCCGGTAGCTCTCCTCCCGCGCCCG +CAGCTCACCGCGGAAAAACTGCGCCATGGCCTCGTAGTACGAAGGCAGCTCGTCGCGGGTGGCGGGCAGG +GTGGGGAACGCCACGTCGCCGTGGGCGCGAATGTCGATCGGGGAGCGCTCGGGGACGTGCGCATCCCCCC +AGTCGATCACGTCGCTGGGCAGCGTCGACAGAAACTTGCACTCCCGGTACATGTCGGCGTTGGTCGGGAA +CCCAGAGAACAGGTCCTCGTTCCAGGTATCTAGCATGGTACACAGCGCGGGACCCGCGCTGAAGCCCAGA +TCGTCGAGGAGACGGTTAAACAGGGCCGCGGGGGGGACGGGCATGGGCGGCGAGGGCATCAGCTGGGCCT +GACTCAGCCGACCGGTGGCGTACAGCGGAGGGGCGGCTGGGGTGTTCTTGGGACCCCCGGCTGGCCTGGG +GGGCGGTGGCGAAACCCCGTCCGCGTCCGCAAACAGATCGTCGACCAACAGGTCCATGGGGGCGGTTGGG +TCCGGGAATAACGATCTCGAGAGGCGAATGAGACGTGCCCGAGCGCCCGGCGGCGGAGAGGGGGGGAGGG +ATCCGGGACCCGCGACAGAAAAAGGCCGGGGCCCTCGCGAAGGGAATCGCCGGGGGTGCCGTGCGTCCCC +GAGGACTGACATCTCGCGTCCACCACCCCGCATTTAAGTATCACCCCAGTGCCGCCCCAAACCTCGTGAC +TTCCCCACCGCTCCGGGCGGCCCGTCCCCCGCGCCCGGAAGGGAGGCGTGTCCTCCCTCCCGCCCCTCCC +GCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTC +CCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCC +TCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCC +CCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCG +CCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCCTCGCCACAAACGCGTGCTGAC +AGCGAAGTGGTTAAATCGACCGTGATGCTTTATTGTCTGTCGTCTGAACGCGGCCGGGGTCGCTACTCGA +GGGGGCGGCGGGGGCGGGAAGCCGAGCGGGCGGGGGCCCGTGCGGTCGCGGCGGCACGCCCCGCGGGGCG +GCCCCGGGCGGCCGCGGTCGCGTCGACGTCCTGCGCCGCGTCGGGATTCACCAACTCGTTCGCGCGCTGC +AGGAGGTTCTTGCCCTCGCAGACCGTCACGCGAATGGTGGTGAGGTCGAGGAGCTCGTTGAGGTCTTCGT +CGGTGTGCGGCCGCGACATGTCCCACAGCTGTACCGCCGCCAGCCGGGCGTGCGTGGCCGCCAGGCGCCC +GACCGCGGCGCAGAAGACGCGCTTGTTGAACCCGGCCACCCGGGGGGTCCACGGCGCCGTGGGGCTCGGT +GGGGCGGTGCTGAAGTGCAGCTTCTTGGCCAGTCCCTGGGCGGGTGTCTTGGTTCTTCCCGAGGCCGTGG +GAGCGGGGGCGTCTAGGAGCACGGCGGAGTCGGCCTGGGCGGGTCGCCTGCCGCGGGCGGGGTCGGTCGC +CGGGGTCGCGGGGGCCTTAGGCGCCCCGCGCGTCATTTTGGGGGTCCGCGCGGGAGGGGCGTGCGAGCGC +CCGCCGGCGCCCACGGGGCCCCCGGGGGGTGGAGGAGCGCGCGCGGGGCCGGGGCCGTGAGAGCCCGCGA +CGGACGCCGAACGACGCGGTCGCGCGGTATCCCGGGACTCGTCGTCGTCTTCGGACGACGACGAGTCCCG +GTAGAGGGCATACCCAGCCTCGTCATAATGGAGAAAGCGAACCTCGCCCCTCGGGCGCGCGCGCATCGGG +CCAGCGCCGCGGCGGAAGTCGTCGCGCGGACTCTCTGGGTCCGCCGGGGAGACCGGGCCATAGTACAGCT +CCTCGTGGGTCCCGCGCGGCGCTTCCCGCGGACACGACTTGACGGAGCGGCGAGAGGTCATGGTCTATCG +GAGACACCGGGGACGCCCGTGCGGATCACAGGGAAGGCGTCGGCGAAGGAGGCAGAGAGCGTCGGAAGGC +GGCGAGGGAGGGAAAGAGGGAGACCGGCGGGGTACGGGAGAGCAGCGAGGGCCTGCGTAACCCACGGGGG +CCGCGGGAGTGGCTCCCTGCGGGTTGCGGGGGAGAGTTTATAGGAAGTGGATATAACCGCAGGCGACGGG +ACTAACCAATCCCCGGGGGGGCCACGGACAGACACGCCCCAAACAGGCCCGACTTCCGCGAGGAAGCGAA +GGCCGGGGGCCGCCCAACGACACGCCCACCCCTTCCCAACAGGGCGGGCTCAGGCTGACCCGGCGGCCAG +TGCCCGCTGGCATATCTGATACACGTGCGCGATCATACATACGCCCATCGAGGTCATGCCTAGATAAAAG +GGCACCAGGACCCCCGGGACGGACACCACACCGGCGCTGTCGCCCCGGCATTGCGCGTCCCCGATAACGC +CGCGTGCGCCTGCCGCGTTCGGCGGCTCCCCGGGCACGCCCGCGACGAGCGCGACGAACAACAGCACCAC +CCAGCGGCCCAGTCTTGCGGGTTTCCCCGTCATCGCGGCGATGAGTCAGTGGGGGCCCAGGGCGATCCTT +GTCCAGACGGACAGCACCAACCGGAATGCCGATGGGGACTGGCAAGCGGCCGTAGCTATTCGCGGGGGCG +GAGTCGTTCAACTGAACATGGTCAACAAACGCGCCGTGGATTTTACCCCGGCAGAATGCGGGGACTCCGA +ATGGGCCGTGGGCCGCGTCTCTCTGGGCCTGCGAATGGCAATGCCGCGGGACTTCTGCGCGATTATTCAC +GCCCCCGCGGTATCCGGCCCCGGGCCCCACGTGATGCTCGGTCTCGTCGACTCGGGCTACCGCGGAACCG +TCCTGGCCGTGGTCGTAGCCCCGAACGGGACGCGCGGGTTTGCCCCCGGGGCCCTCCGGGTCGACGTGAC +GTTTCTGGACATCCGGGCCACCCCCCCGACCCTCACCGAGCCGAGCTCCCTGCACCGGTTTCCGCAGTTG +GCGCCGTCCCCGCTGGCAGGGTTACGAGAAGATCCTTGGTTGGACGGGGCGCTCGCGACCGCCGGGGGGG +CGGTGGCCCTGCCGGCCAGACGGCGCGGGGGATCGCTGGTCTACGCGGGCGAGCTAACGCAGGTGACCAC +CGAGCACGGCGACTGCGTGCACGAGGCGCCCGCCTTTCTGCCAAAGCGCGAGGAGGACGCAGGCTTTGAC +ATTCTCATCCACCGAGCCGTGACCGTCCCGGCCAACGGCGCCACGGTCATACAGCCGTCCCTCCGCGTAT +TGCGCGCGGCCGACGGACCAGAGGCCTGCTATGTGCTGGGGCGGTCGTCGCTCAATGCCAGGGGCCTCCT +GGTCATGCCTACGCGCTGGCCCTCCGGGCACGCCTGTGCGTTTGTTGTATGTAACCTGACCGGAGTCCCG +GTGACCCTACAAGCCGGGTCCAAGGTCGCCCAGCTGCTCGTCGCGGGGACCGACGCCCTCCCCTGGATCC +CCCCCGACAACATCCACGAGGACGGCGCATTCCGGGCCTACCCCAGAGGGGTTCCGGACGCGACCGCCAC +CCCCCGAGACCCGCCGATTTTGGTGTTTACGAACGAGTTTGACGCGGACGCCCCCCCAAGCAAGCGGGGG +GCCGGGGGGTTTGGCTCCACTGGCATCTAGACCGCGCCTCGCGTCGGGCCAGATGGGGCCCCGGTCAATA +AAGAGCTCTGTTTCGCATATGCCCTGGTGTTGGCGGTTTTTTTTGTTGTCTGTCTGCCCGGCGCTCGGTT +GTCCGTTCTGTCGTCGCTATCACATACGCACAAACACACGGGTAGAGTGGAACCGAAACCGGTCGACGTT +TATTCACCACACAGAAACACAAGCTAAGCGAGAAGGAGGGGGGCCTCGGTCGACGAGGCCTGGCGTTTGG +GGGCGGACGTGCGATGACGTGGGTCCGGTGTAGGGTCCGCGGGGGGCACGGGCCCGGGGCGAACGGGGGA +TCTGTCGCCGGCGTGGGTGACTGGGACCGACGCAACCTCCGGGGCTTGTGCCCTCGTAGGCCCGGGGGGG +GCCTCGGTCGCTCCGAGCCCCGCGGTGCGGGTCCCTCCGGCCAGAGCCGAGGTGGAGAGACCAAGGGCCC +GCTCCGCGATCGCCACGTCCTCCATGACCACGTCGCTCTCGGCCATGCTCCGAATGGCCTGGGAGACGAG +CACGTCCGCCGACTTGTCCGCGGCCCCCACCGACATGTACATCTGCAGGATGGTGGCCATGCACGTGTCC +GCCAGGCGGCGCATCTTGTCCCGATGCGCCGCAACGGCCCCGTCGATGGTGGAGCCCTCGAGTCCCGGGT +GGTGGCGCGCCAGCCTCTCGAGGTTGACCATGCAGGCGTGGTATGTGCGGGCCAGGGCGCGCGCCTTCAC +GAGGCGCCGGGTGTCGTCCAGCGACTCTAGGGCGTCGTCGAGCGTGATGGGGGCGGGCAAAAGCGCATTG +ACCACCGCCAGGGCCTCCTGCAGCCGCGGCTCCGCCTCCGAGGGCGGAGCCGCGGCCCGAATCATCTCAT +ATTGTTGTTCCTCGGGGCGCGTTCCCCAACCGCACAGCACCCCGAGCAGGGACGCCATCCCGGAACACGC +GCGCGGCTCTGCGCCGGCTTTCCCCCACCCCACCCCCTCCGGGTTCGCAGGGGCGATGGGGACGGAAGAC +TGCGATCACGAAGGGCGGTCGGTTGCGGCTCCCGTGGAGGTTACGGCGCTGTATGCGACCGACGGGTGCG +TTATCACCTCCTCGCTCGCCCTCCTCACAAACTGCCTGCTGGGGGCCGAGCCGTTGTATATATTCAGCTA +CGACGCGTACCGGCCCGATGCGCCCAATGGCCCCACGGGCGCGCCCACCGAACAGGAGAGGTTCGAGGGG 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+CCACCCACGACCCCAGCCCCGCGGCCAGCACGGAGCAGCCCTCGCCCCTGGGTCGGGAGGCGGTGGAACA +GTTCTTCCGGCACGTGCGCGCCCAGCTGAACATCCGCGAGTACGTAAAGCAAAACGTCACCCCCAGGGAA +ACCGCCCTGGCGGGAGACGCGGCCGCCGCCTACCTGCGCGCGCGCACGTATGCCCCGGCGGCCCTCACGC +CCGCCCCCGCGTACTGCGGGGTCGCAGACTCGTCCACCAAAATGATGGGACGTCTGGCGGAAGCAGAAAG +GCTCCTAGTCCCCCACGGCTGGCCCGCGTTCGCACCAACAACCCCCGGGGACGACGCGGGGGGCGGCACT +GCCGCCCCCCAGACCTGCGGAATCGTCAAGCGCCTCCTCAAGCTGGCCGCCACGGAGCAGCAGGGCACGA +CGCCCCCGGCGATCGCGGCTCTCATGCAGGACGCGTCGGTCCAAACCCCCCTGCCCGTGTACAGGATTAC +CATGTCCCCGACCGGCCAGGCGTTTGCCGCGGCGGCGCGGGACGACTGGGCCCGCGTGACGCGGGACGCG +CGCCCGCCGGAAGCGACCGTGGTCGCGGACGCGGCGGCGGCGCCCGAGCCCGGCGCGCTCGGCCGGCGGC +TCACGCGCCGCATTTGCGCCCGGGGCCCCGCGCTCCCCCCGGGCGGCCTGGCCGTCGGGGGCCAGATGTA +CGTGAACCGCAACGAGATCTTCAACGCCGCGCTGGCCGTTACGAACATCATCCTGGATCTGGACATCGCC +CTGAAGGAGCCCGTCCCCTTTCCCCGGCTCCACGAGGCCCTGGGTCACTTTAGGCGCGGGGCGCTGGCGG +CGGTTCAGCTGTTGTTTCCCGCGGCCCGCGTAGACCCCGACGCCTATCCCTGTTATTTTTTCAAAAGCGC +CTGTCGGCCCCGCGCGCCGCCCGTCTGTGCGGGCGACGGGCCCTCGGCCGGTGGCGACGACGGCGACGGG +GACTGGTTCCCCGACGCCGGTGGTCCCGGCGACGAGGAGTGGGAGGAGGACACGGACCCCATGGACACGA +CCCACGGCCCCCTCCCGGACGACGAGGCCGCGTACCTCGACCTGCTACACGAACAGATACCAGCGGCGAC +GCCCAGCGAACCGGACTCCGTCGTGTGTTCCTGCGCCGACAAGATCGGGCTGCGCGTGTGCCTACCGGTC +CCCGCCCCGTACGTTGTGCACGGCTCCCTGACGATGCGTGGGGTGGCGAGGGTGATCCAGCAGGCGGTGC +TGTTGGACCGCGACTTCGTGGAGGCCGTAGGGAGCCACGTAAAGAACTTTTTGCTGATCGATACGGGCGT +GTACGCCCACGGCCACAGCCTGCGCTTGCCGTATTTCGCCAAGATCGGCCCCGACGGCTCCGCGTGCGGC +CGGTTATTGCCCGTCTTCGTGATCCCCCCCGCGTGCGAGGACGTTCCGGCGTTCGTCGCCGCGCACGCCG +ACCCGCGGCGCTTCCACTTTCACGCCCCGCCCATGTTTTCCGCGGCCCCGCGGGAGATCCGCGTCCTCCA +CAGCCTGGGCGGGGACTATGTCAGCTTTTTCGAGAAGAAGGCGTCGCGCAACGCCCTGGAGCACTTTGGG +CGACGCGAGACCCTGACGGAGGTTCTGGGCCGCTACGATGTGCGGCCCGACGCCGGGGAGACCGTGGAGG +GGTTCGCGTCAGAACTGCTGGGGCGAATAGTCGCGTGCATCGAGGCCCACTTTCCCGAGCACGCGCGGGA +ATATCAGGCCGTGTCCGTTCGCCGGGCCGTCATTAAGGACGACTGGGTCCTGCTGCAGCTGATCCCCGGC +CGCGGCGCCCTGAACCAAAGCCTCTCGTGTCTGCGCTTCAAGCACGGCAGGGCAAGTCGCGCGACGGCCC +GGACCTTTCTCGCGCTGAGCGTCGGGACCAACAACCGCCTATGCGCGTCCCTGTGTCAGCAGTGCTTTGC +CACTAAATGCGATAACAACCGCCTGCACACGCTGTTTACCGTCGATGCGGGCACGCCATGCTCGCGGTCC +GCTCCCTCCAGCACCTCACGACCGTCATCTTCATAACGGCCTACGGCCTCGTGCTCGCGTGGTACATCGT +CTTTGGTGCCAGTCCGCTCCACCGATGTATTTACGCGGTGCGCCCCGCCGGGGCACACAACGATACCGCC +CTCGTGTGGATGAAGATAAACCAGACGCTGTTGTTTCTGGGCCCGCCGACCGCCCCCCCCGGCGGGGCAT +GGACCCCCCACGCCCGCGTCTGCTACGCCAATATCATCGAAGGTCGGGCCGTGTCCCTCCCGGCCATCCC +CGGCGCCATGAGCCGCCGGGTCATGAACGTGCACGAGGCCGTAAACTGCTTGGAGGCCCTCTGGGACACC +CAGATGCGCCTGGTGGTCGTCGGTTGGTTTCTGTATCTAGCGTTCGTCGCCCTTCACCAACGACGATGCA +TGTTCGGCGTCGTGAGTCCCGCGCACAGCATGGTGGCCCCGGCGACCTATCTTTTGAACTACGCCGGCCG +CATAGTGTCGAGCGTGTTCTTGCAATACCCCTACACGAAAATCACCCGCCTCCTCTGCGAGCTATCCGTT +CAACGCCAGACCCTGGTGCAGCTGTTCGAGGCGGATCCGGTCACCTTCTTGTACCACCGCCCGGCCGTTG +GCGTCATCGTGGGCTGCGAGCTGCTGCTCCGCTTCGTGGCCCTCGGTCTCATCGTCGGCACCGCTCTCAT +CTCCCGGGGCGCCTGCGCGATCACACACCCCCTGTTTCTAACAATCACCACCTGGTGTTTCGTGTCCATC +ATCGCCCTGACGGAGCTGTATTTCATCCTGCGGCGGGGCTCGGCCCCCAAAAACGCGGAACCAGCGGCCC +CCAGGGGGCGCTCCAAAGGGTGGTCGGGCGTCTGCGGGCGCTGCTGTTCCATCATCCTCTCCGGGATCGC +CGTGCGCCTGTGCTATATCGCCGTCGTGGCCGGGGTGGTGCTCGTGGCGCTTCGCTACGAACAGGAGATT +CAGCGGCGCCTGTTTGATCTGTGACGTAACGCCTCTTCCGTTGGAAGAGGCGGACCCAGTCGCCCATGCA +AATTAAATACACGACCCGCCTCGGGCCTACGCACCCTCGCACGTCGCATGCAAATTAAAATCGTGCACAG +AGCCGATCCGGCCTCGGGTCTGCTTGCCCCTCCCCCGGCCCAGCACAGGCAGGCTCGTCCGACTTCCGCA +TACACCCCACCCTACCGCGTGCTTCCGCACCCCCGCCTACGCGTGTACGCGAAGGCGGACCCAGACATGC +CGTATGCTAATTAAATACATAAAACCCACCCTCGGCGTCCGATTGGTTTCTGGGGACGGCGGGGGCGGGG +GCGGTGACGCCCGACGGGGAGGGACAAGGAGGAGTTTCGGAAAGCCGGCCCCGGTCGTGCGGGTATAAGG +GCAGCCACCGGCCCACTGGGCGCTGTGTGCTGCCGTGTGCCGACCCCGGTTGCGCGTCGGTGCCGCTCCT +CGATTCGGACCCGGCCACTCTCTTCCGACACGCGCCCCCTCGGAGGACACCCGCCATCCCAGCCCCGGCG +ACCTACAACATGGCTACCGACATTGATATGCTAATCGACCTAGGATTGGACCTGTCCGACAGCGAACTCG 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+CACACAGGCGGGACACCTCGATCACCGTCCGAAAAAAGGCCCGGTGGTCCGCGGGCAGCATCTGCAGGTG +CGCCAGGGCCTGGGCGTTGAGAGGGTACAACTCGGAGCCGGGGGACTCCGGGGGCCGGTCCGCGCGGTGC +CGCGAGTGGGCACGCTTTGGGGCCCGGGTGTCGGACGCGGGCGCGTTATGGATCCCGACGCGGGGCAGAA +CGTACGTGCGTTGGCGCGGCGATGAGGGGTCCGGGCTGCCGAGGGGGGCGTAGGGGACCGGGCTAGGCAA +GCCCGCGGGTTGCGCGGGGTTCCCGTGGGGGTCTAGGCTCCCTGGGCACCCGTGGGGGTCGTGGGGGTCG +CGGGTCCCTGGGTATGCGCGGGACCCTGGGTTCTCTGGGAGATCGTGGAACTCGCGGTTCCCTGGGCTCT +CGGGGAACCCGGGGCTCCCTGGGGACACGTGGTGCCCTGGGAATTCTTGATGGTCGGACGGCTTCAGATG +GCTTCGGGATCGAGAGGGCCGCACAGACTCGTAGTAGACCCGAATCTCCACGTTTCCCCGCCGCCGGATC +ATGGTCGCCGCCCCGGTGCGGGGGCCCGTCGGTCGGAAGCGAGTGCCCTTCAAGCGTGTCCGCTCCTCTG +GGCTGCATGCCGTCGGATGGGGTGCCTTTTAAGGAAAGGTCTCGGCTGCCCGCCCCAACCGGGGTTTGGG +GGTGGGCCGGGGAAACCCCGGATGCCATGGGGGGGTCACACCCTAAACGCCGGCGCGCTGGTTGGGTGGG +GGTAGAGGGGAGTCCCCGGTCGACGAGATCGTATCAAGGGGCCAGCACGCGATCCTGCCGCTCGTTCGAT +CTAGCACACCCACGGGTCTGCTGTGTGGGATTTCGACTCGCGGGATCCGATCGCACGTCCGGAGGACACA +GCAGCGGGAGCTCCGGGTCGGTCACCGCAGTTCTGGCCGCCTCTCGGTCCTCCCGTTCCCTTTTATGGAT +CTCCGCGCAGACATCGCCATACGTCCGGTGTGTGCACCGCGAAGAATCCAGAAACATATCCGTCGTTTTC +AGGGCCCAAGACATGGTGTCCCGTCCACGAAGGCGGCGCCCGGCCTGCGAGAAAGCGCGGATGTTGGGAT +CGGGGCCCCGTCCCCCCGTCCCGTCCCCCCGTCCCGTCCCCCCGTCCCGTCCCCCCGTCCCGTCCCCCCG +TCCCGTCCCCCCGTCCCGTCCCCCCGGCCCGTCCCCCCGGCCCGTCCCCCCGGCCCGTCCCCCCGGCCCG +TCCCCCCGGCCCGTCCCCCCGGCCCGTCCCCCCGGCCCGTCCCCCCGTCCCGTCCCCCCGTCCCGTCCCC +CCGTCCCGTCCCCCCGTCCCGTCCCCCCGTCCCGTCCCCCCGTCCCGTCCCCCCGTCCCGTCCCCCCGTC +CCGTCCCCCCGTCCCGGCCCCCCGTCCCGGCCCCCCGTCCCCCCGGGTCACCGTACCTGCGATAAGGCTG +CAGTGGGTGGATGGGTCCTCGCGGTACGTACAGGGTGGGGGGGGGAGGGAAAGGCAGAACGAAAAGGAAC +CGATGCGCCCGCGTCTCTGTATCCGATCCGATCCGGGTGCGTCGGTGCCCCGCTCGCCGCCGGCGTCTCT +GTCTCGCTGTGGCCCCCTTCGCGATGCCGCCGCTGCCGTCCCGGTCTCCGCCGCGCAGCCGGTGTGCCCC +TGGTGCGGCGGCGACCGGGACGCCGGCCCTTTATGTGCGCGAGGAACGGCCCGCCCCCCGTCCGGGCCCG +CCTCGGGGCGGGGCCCGCGGGATGACGCGGGCCCCGGGCAGGGCGCCAGCGCTCGCACTTTGCCCTAATA +ATATATATACTATTAGGACGAAGTGCGAACGCTTCGCGTTCTCACTTCTTTTACCCTGCGGCCCCGCCCC +CTTTGGGGCGGAGCCCGCGGGATGACGCGGGCCCCGGGCAGGGCGCCAGTGCTCGCACTTTGCCCTAATA +ATATATATACTATTAGGACGAAGTGCGAACGCTTCGCGTTCTCACTTCTTTTACCCTGCGGCCCCGCCCC +CTTTGGGGCGGAGCCGCCCGCGGACCAACGGGGCGACCTCGCCGGCCCCTTTGGGGCCGGCGGGGGCCAA +CGGGAGCGCGGGGCCGGCATCTCATTACCACGAACCCGGAAGGGCAGGGGAGCGAGCCCGCCCGCGACGA +GGGTCTCATTAGCATCGCGGGCGGAAGCGGAAGCCGCCCGCGCCGGGCGCTAATGAGATGCCGCGCGGGC +GGAGCCGGCGGCGGCGCGACCAACGGGCCGCCGCCACGGACGCGGACGCGCGGGCGTCGGGGCGGGGCCG +CGCATAATGCGGTTCCACCTGGGGGCGGAACCCCGGCGAGCCGGGGCGCGGCGGCGTCGATCGCTCCTCC +TCCGCGTCCTCCTCCTTTCCCCCCGCCCCGCGCGCCCCGAGGACTATATCAGCCAGGCGACGGGGCGATC +GTCCACACGGAGCGCGGCTACCGACGCGGCCGCCAGGATCTACCCGATCGGCGCGGAGAGGCGAAAAGAC +ACAGGCACACGCACGCACCGCACGGGGGGGGGGAGAGAGACCGCCAACCACCCCCCCCCCCACTGCCGCC +CCTGAAGAAGAAGAAGACCCCCCGCACACCCCGGTCGGAGGCGATGTCGGCGGAGCAGCGGAAGAAGAAG +AAGACGACGACGACGCAGGGCCGCGGGGCCGAGGTCGCGATGGCGGACGAGGACGGGGGACGTCTCCGGG +CCGCGGCGGAGACGACCGGCGGTCCCGGATCTCCGGATCCAGCCGACGGACCGCCGCCCACCCCGAACCC +GGACCGTCGCCCGGCCGCGCGGCCCGGGTTCGGGTGGCACGGTGGGCCGGAGGAGAACGAAGACGAGGCC +GACGGCGCCGCCGCCGATGCCGATGCCGACGAGGCGGCCCCGGCGTCCGGGGAGGCCGTCGACGAGCCTG +CCGCGGACGGCGTCGTCTCGCCGCGGCAGCTGGCCCTGCTGGCCTCGATGGTGGACGAGGCCGTTCGCAC +GATCCCGTCGCCCCCCCCGGAGCGCGACGGCGCGGAAGAAGAAGCGGCCCGCTCGCCTTCTCCGCCGCGG +ACCCCCTCCATGCGCGCCGATTATGGCGAGGAGAACGACGACGACGACGACGACGACGATGACGACGACC +GCGACGCGGGCCGCTGGGTCCGCGGACCGGAGACGACGTCCGCGGTCCGCGGGGCGTACCCGGACCCCAT +GGCCAGCCTGTCGCCGCGACCCCCGGCGCCCCGCCGACACCACCACCACCACCACCACCGCCGCCGGCGC +GCCCCCCGCCGGCGCTCGGCCGCCTCTGACTCATCAAAATCCGGATCCTCGTCGTCGGCGTCCTCCGCCT +CCTCCTCCGCCTCCTCCTCCTCGTCTGCATCCGCCTCCTCGTCTGACGACGACGACGACGACGCCGCCCG +CGCCCCCGCCAGCGCCGCAGACCACGCCGCAGACCACGCCGCAGACCACGCCGCAGACCACGCCGCAGAC +CACGCCGCAGACCACGCCGCGGGCGGGACCCTCGGCGCGGACGACGAGGAGGCGGGGGTGCCCGCGAGGG +CCCCGGGGGCGGCGCCCCGGCCGAGCCCGCCCAGGGCCGAGCCCGCCCCCGGGGCCGGGGCGGGCTCGGC +CCGGACCCCCGCGGCGACCGCGGGCCGCCTGGAGCGCCGCCGGGCCCGCGCGGCGGTGGCCGGCCGCGAC +GCCACGGGCCGCTTCACGGCCGGGCGGCCCCGGCGGGTCGAGCTGGACGCCGACGCGGCCTCCGGCGCCT +TCTACGCGCGCTACCGCGACGGGTACGTCAGCGGGGAGCCGTGGCCCGGGGCCGGCCCCCCGCCCCCGGG +GCGCGTGCTGTACGGCGGGCTGGGCGACAGCCGCCCCGGCCTCTGGGGGGCGCCCGAGGCGGAGGAGGCG +CGGGCCCGGTTCGAGGCCTCGGGCGCCCCGGCGCCCGTGTGGGCGCCCGAGCTGGGCGACGCGGCGCAGC +AGTACGCCCTGATCACGCGGCTGCTGTACACGCCGGACGCGGAGGCGATGGGGTGGCTCCAGAACCCGCG +CGTGGCGCCCGGGGACGTGGCGCTGGACCAGGCCTGCTTCCGGATCTCGGGCGCGGCGCGCAACAGCAGC +TCCTTCATCTCCGGCAGCGTGGCGCGGGCCGTGCCCCACCTGGGGTACGCCATGGCGGCGGGCCGCTTCG +GCTGGGGCCTGGCGCACGTGGCGGCCGCCGTGGCCATGAGCCGCCGCTACGACCGCGCGCAGAAGGGCTT +CCTGCTGACCAGCCTGCGCCGCGCCTACGCGCCCCTGCTGGCGCGCGAGAACGCGGCGCTGACCGGGGCG +CGAACCCCCGACGACGGCGACGACGCCCGCGGGAAGCCCGCCGCCGCCGCCCCGTTGCCGTCGGCGGCGG +CGTCGCCGGCCGACGAGCGCGCGGTGCCCGCCGGCTACGGCGCCGCGGGGGTGCTCGCCGCCCTGGGGCG +CCTGAGCGCCGCGCCCGCCTCCGCGCCGGCCGGGGCCGACGACGACGACGACGACGACGGCGCCGGCGGT +GGTGGCGGCGGCGGCCGGCGCGCGGAGGCGGGCCGCGTGGCCGTGGAGTGCCTGGCCGCCTGCCGCGGGA +TCCTGGAGGCGCTGGCGGAGGGCTTCGACGGCGACCTGGCGGCCGTGCCGGGGCTGGCCGGAGCCCGGCC +CGCCGCGCCCCCGCGCCCGGGGCCCGCGGGCGCGGCCGCCCCGCCGCACGCCGACGCGCCCCGCCTGCGC +GCCTGGCTGCGCGAGCTGCGGTTCGTGCGCGACGCGCTGGTGCTGATGCGCCTGCGCGGGGACCTGCGCG +TGGCCGGCGGCAGCGAGGCCGCCGTGGCCGCCGTGCGCGCCGTGAGCCTGGTCGCCGGGGCCCTGGGCCC +GGCGCTGCCGCGGAGCCCGCGCCTGCTGAGCTCCGCCGCCGCCGCCGCCGCGGACCTGCTCTTCCAGAAC +CAGAGCCTGCGCCCCCTGCTGGCCGACACCGTCGCCGCGGCCGACTCGCTCGCCGCGCCCGCCTCCGCGC +CGCGGGAGGCGCGCAAGCGCAAGAGCCCCGCCCCGGCCAGGGCGCCGCCGGGCGGCGCCCCGCGCCCCCC +GAAGAAGAGCCGCGCGGACGCCCCCCGCCCCGCGGCCGCCCCTCCCGCGGGGGCCGCGCCCCCCGCCCCG +CCGACGCCGCCGCCGCGCCCCGCGGCGCTGACCCGCCGGCCCGCCGAGGGCCCCGACCCGCAGGGCGGCT +GGCGGCGCCAGCCGCCGGGGCCCAGCCACACGCCGGCGCCCTCGGCCGCCGCCCTGGAGGCCTACTGCGC +CCCGCGGGCCGTGGCCGAGCTCACGGACCACCCGCTCTTCCCCGCGCCGTGGCGCCCGGCCCTCATGTTC +GACCCGCGCGCGCTGGCCTCGCTGGCCGCGCGCTGCGCCGCCCCGCCCCCCGGCGGCGCGCCCGCCGCCT +TCGGCCCGCTGCGCGCCTCGGGCCCGCTGCGCCGCGCGGCGGCCTGGATGCGCCAGGTGCCCGACCCGGA +GGACGTGCGCGTGGTGATCCTCTACTCGCCGCTGCCGGGCGAGGACCTGGCCGCGGGCCGCGCCGGGGGC +GGGCCCCCCCCGGAGTGGTCCGCCGAGCGCGGCGGGCTGTCCTGCCTGCTGGCGGCCCTGGGCAACCGGC +TCTGCGGGCCCGCCACGGCCGCCTGGGCGGGCAACTGGACCGGCGCCCCCGACGTCTCGGCGCTGGGCGC +GCAGGGCGTGCTGCTGCTGTCCACGCGGGACCTGGCCTTCGCCGGCGCCGTGGAGTTCCTGGGGCTGCTG +GCCGGCGCCTGCGACCGCCGCCTCATCGTCGTCAACGCCGTGCGCGCCGCGGACTGGCCCGCCGACGGGC +CCGTGGTCTCGCGGCAGCACGCCTACCTGGCCTGCGAGGTGCTGCCCGCCGTGCAGTGCGCCGTGCGCTG +GCCGGCGGCGCGGGACCTGCGCCGCACCGTGCTGGCCTCCGGCCGCGTGTTCGGGCCGGGGGTCTTCGCG +CGCGTGGAGGCCGCGCACGCGCGCCTGTACCCCGACGCGCCGCCGCTGCGCCTCTGCCGCGGGGCCAACG +TGCGGTACCGCGTGCGCACGCGCTTCGGCCCCGACACGCTGGTGCCCATGTCCCCGCGCGAGTACCGCCG +CGCCGTGCTCCCGGCGCTGGACGGCCGGGCCGCCGCCTCGGGCGCGGGCGACGCCATGGCGCCCGGCGCG +CCGGACTTCTGCGAGGACGAGGCGCACTCGCACCGCGCCTGCGCGCGCTGGGGCCTGGGCGCGCCGCTGC +GGCCCGTCTACGTGGCGCTGGGGCGCGACGCCGTGCGCGGCGGCCCGGCGGAGCTGCGCGGGCCGCGGCG +GGAGTTCTGCGCGCGGGCGCTGCTCGAGCCCGACGGCGACGCGCCCCCGCTGGTGCTGCGCGACGACGCG +GACGCGGGCCCGCCCCCGCAGATACGCTGGGCGTCGGCCGCGGGCCGCGCGGGGACGGTGCTGGCCGCGG +CGGGCGGCGGCGTGGAGGTGGTGGGGGCCGCCGCGGGGCTGGCCACGCCGCCGAGGCGCGAGCCCGTGGA +CATGGACGCGGAGCTGGAGGACGACGACGACGGACTGTTTGGGGAGTGACGGGGGGGAAACTTCCGGGAG +CGGGGGGGGGGGGAGATGGGGAGAGGGGGAAGGAATCGGGCGTCTGTGCGCCTTTGAGACAGACGCGGCG +ATGGCCGCGCGCGTGTGTGAGAAATAAAGAACGAGACAGACGAAAACGTACCGCCTTGTGTGGTTTATTC +GGGGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCG +GGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGG +GTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGT +CGGGCGGGGGTCGGGGTCGGGCGGGGGTCGGGGTCGGGCGGCGGCACGTCTCCCGCGCCCGCGGGGGGTC +TGGGGCTCTGACCTGAGTGCAGGTTACGAAGGTCAGGTGGCCCGAGCCCCCCCGCAGGAGCGGGAGGGAA +GGCACGGCGCGCGGGGGGGAGGGGCTGCTGCGAGCTCGGGCCCGCGGGCGCGGGGGGAGGCGGCCGGTTC +CGGGGGAGGGACGGGGAAGGGGGCGCGCGGGGCTGCCCTGCCGCCCGCCCGCCGCCGCCGCCCGCCTTAA +GCCGCGCGGGGGCGGGCGCGGGAACGCAGCCCCGCGGCGCGCGGGGGGAGGGGCTGCTGCGAGCTCGGCG +GGATGGAGGGGAGGGCAGGGAGGGGGTGGCGGGGAACCGTGTGCGGGCGGGCGGGTGCTTGGTGCTACTG +TGTGGTCTGCGAGGGCGAGCGGTGGTGCGACTGTCGTCTTTAGGGGGGCGGGGAGCTCGGGAGTTTGTGG +CGGTCCGCGACAGCCTGCCGCGGGGGCGGGCGCGGGAAGAAAGCCGCGCGGGGGCGCGGTGCGACTGTCG +CCGTGACGGCGGGAGTCTTTGGGGGGGGCGGGCGCGGGGAGCCTGGTGGTCCGCGAGGTAGCCGAGTGAG +TGAGCCTGCTAGTCCCCGTCCTGCCGCGCGGGGGCGGGCGCGGGAAAAAAGCCGCGCGGGGGCGGCCGCG +GGGAAGCGGGCCCGCGGCGCGCGGGGGGAGGGGCGCCGCCCGCGGGGGAGCGGCCGGTTCCGGGGGAGGG +CCGGGAGCGGCGGGCGCGGGGAAGGGGGCGCGCGGGGCTGCCCTGCCGCCCGCCCGCCGCCGCCGCCCGC +CTTCGCGCCGGGCCCGCGGCGCGCGGGGGGAGGGGCGCCGCCCGCGGGGGAGCGGCCGGTTCCGGGGGAG +GGCCGGGAGCGGCGGGCGCGGGGAAGGGGGCGCGCGGGGCTGCCCTGCCGCCCGCCCGCCGCCGCCGCCC +GCCTTCGCGCCCCCCCCCCAAAAACACCCCCCCGGGGGTTCACTCCCCGGGGGAAAGGAGGCGGGGCGGG +AGTCCCCGTCCTGCC diff --git a/resources/polio/AY560657.1.fasta b/resources/polio/AY560657.1.fasta new file mode 100644 index 00000000..b5adbb54 --- /dev/null +++ b/resources/polio/AY560657.1.fasta @@ -0,0 +1,108 @@ +>AY560657.1 Human poliovirus 1 strain Brunhilde, complete genome +TTAAAACAGCTCTGGGGTTGTTCCCACCCCAGAGGCCCACGTGGCGGCCAGTACACCGGTACCACGGTAC +CCTTGTACGCCTGTTTTATACTCCCCTCCCCGTAAACTAGAAGCACGAAACACAAGTTCAATAGAAGGGG +GTACAAACCAGTACCACCACGAACAAGCACTTCTGTTCCCCCGGTGAGGTCACATAGACTGTCCCCACGG +TCAAAAGTGACTGATCCGTTATCCGCTCACGTACTTCGGAAAGCCTAGTACCACCTTGGAATCTACGATG +CGTTGCGCTCAGCACTCGACCCCGGAGTGTAGCTTAGGCTGATGAGTCTGGACGTTCCCCACTGGTGACA +GTGGTCCAGGCTGCGTTGGCGGCCTACCTGTGGTCCACAACCACAGGACGCTAGTAGTGAACAAGATGTG +AAGAGCCCACTGAGCTACCTGAGAATCCTCCGGCCCCTGAATGCGGCTAATCCCAACCACGGAGCAGGTA +ATCGCAAACCAGCGGTCAGCCTGTCGTAACGCGTAAGTCTGTGGCGGAACCGACTACTTTGGGTGTCCGT +GTTTCCTTTTATTTTTATGGTGGCTGCTTATGGTGACAATCATAGATTGTTATCATAAAGCAAATTGGAT +TGGCCATCCGGAGTGAGCTAAACTATCTATTTCTCTGAGTGTTGGATTCGTTTCACCCACATTCTGAACA +ATCAGCCTCATTAGTGTTACCCTGTTAATAAGACGATATCATCACGATGGGTGCTCAGGTTTCATCACAG +AAAGTGGGCGCACATGAAAATTCAAATAGAGCATATGGTGGTTCTACCATTAATTACACCACCATTAATT +ATTATAGAGATTCAGCTAGCAATGCGGCTTCGAAACAGGACTTCTCTCAAGATCCATCCAAGTTCACCGA +GCCCATCAAGGACGTCTTGATAAAGACAGCCCCAATGCTAAACTCGCCAAACATAGAGGCTTGCGGGTAT +AGCGATAGAGTCCTGCAATTAACACTGGGAAACTCCACTATAACCACACAGGAAGCGGCTAATTCAGTAG +TCGCTTATGGGCGTTGGCCTGAGTACCTGAGAGACAGCGAAGCCAATCCAGTGGATCAACCGACAGAACC +AGACGTCGCTGCATGTAGGTTTTATACACTAGACACCGTGTCTTGGACGAAAGAGTCGCGAGGGTGGTGG +TGGAAGTTGCCTGATGCACTGAGGGACATGGGACTGTTTGGGCAAAATATGTACTACCACTACCTAGGTA +GGTCCGGGTACACTGTACATGTACAGTGTAATGCCTCCAAATTCCACCAGGGAGCACTTGGGGTATTCGC +CGTACCAGAGATGTGCTTGGCCGGGGACAGTAACCCCACTACCACATACACCAGCTATCAAAATGCCAAT +CCTGGCGAGAAAGGAGGCACTTTCACAGGTACGTTCACCCCTGACAACAACCAGATATCACCTGCCCGCA +GGTTTTGCCCGGTGGATTACCTTTTTGGAAACGGCACATTGTTGGGGAACGCCTTTGTGTTCCCGCACCA +GATAATAAACTTACGGACCAATAACTGTGCCACATTGGTGCTCCCTTACGTGAACTCCCTCTCGATAGAT +AGTATGGTGAAGCACAATAATTGGGGAATCGCAATAGTACCATTGGCCCCATTAAATTTTGCTAATGAGT +CCTCCCCAGAAATTCCAATCACCTTAACCATAGCCCCTATGTGCTGTGAGTTCAATGGATTAAGAAACAT +TACCCTGCCACGTTTACAGGGCCTGCCGGTCATGAACACCCCTGGTAGTAATCAATATCTTACTGCAGAC +AACTTCCAGTCACCGTGTGCGCTGCCTGAATTTGACGTAACCCCACCTATTGACATACCCGGTGAAGTTA +AGAACATGATGGAATTGGCTGAAATTGACACCATGATTCCCTTTGACTTAAGTGCCACGAAAAAGAACAC +CATGGAAATGTATAGGGTTCGGTTAAGTGACAAACCACACACAGACGACCCCATACTCTGTCTGTCGCTT +TCTCCAGCTTCAGATCCTAGGTTGTCACATACCATGCTTGGAGAAATCCTAAATTACTACACACACTGGG +CAGGATCCCTGAAGTTCACGTTTCTGTTCTGTGGGTCCATGATGGCAACTGGCAAACTGTTGGTGTCATA +CGCGCCTCCTGGAGCCGACCCACCAAAGAAGCGTAAGGAGGCAATGTTGGGAACACATGTGATCTGGGAC +ATAGGACTGCAATCCTCATGCACTATGGTAGTACCATGGATAAGCAACACCACGTACCGGCAGACCATTG +ATGATAGTTTCACCGAAGGCGGATACATCAGCGTCTTCTACCAAACCAGAATAGTGGTGCCCCTTTCGAC +GCCCAGGGAGATGGACATCCTTGGTTTTGTGTCAGCGTGTAATGACTTCAGTGTGCGCTTGTTGCGAGAC +ACTACACACATAGAGCAAAAAGCGCTAGCACAGGGGTTAGGTCAGATGCTTGAAAGCATGATTGACAACA +CAGTCCGTGAGACGATGGGGGCGGCAACGTCTAGAGACGCTCTCCCAAACACCGAAGCCAGTGGACCGGC +ACACTCCAAGGAAATCCCGGTACTCACCGCAGTGGAAACTGGGGCTACAAATCCACTAGTCCCTTCTGAC +ACAGTGCAAACCAGACATGTTATACAACACAGGTCTAGGTCAGAGTCTAGCATAGAGTCTTTCTTCGCGC +GGGGCGCATGCGTGACCATCATGACTGTAGACAACTCAGCTTCCACCACAAACAAGGACAAGCTATTTTC +AGTGTGGAAAATCACGTATAAAGACACTGTTCAGTTACGGAGGAAATTGGAGTTTTTCACTTATTCTAGA +TTTGATATGGAATTTACCTTTGTAGTCACTGCAAATTTCACTGAGACTAACAATGGGCATGCTTTAAATC +AGGTGTACCAAATTATGTACGTACCACCAGGCGCTCCAGTGCCTGAGAAATGGGACGACTACACATGGCA +AACCTCATCAAACCCATCAATTTTTTACACCTACGGAACAGCTCCTGCCCGGATCTCGGTACCGTATGTT +GGTATTTCGAACGCCTATTCACACTTTTACGACGGTTTTTCTAAAGTACCACTGAAGGACCAGTCGACAG +CACTAGGCGACTCCCTCTATGGTGTAGCATCTTTAAACGATTTCGGTATTTTGGCTGTTAGAGTAGTCAA +TGATCACAACCCGACCAAAGTCACCTCCAAAGTCAGAGTGTATCTAAAACCCAAGCACATCAGAGTCTGG +TGCCCGCGTCCACCGAGGGCAGTGGCGTACTACGGCCCTGGAGTGGATTACAAGGATGGTACGCTCACAC +CCCTTTCCACCAAGGAACTGACCACATATGGATTCGGACACCAAAACAAAGCGGTGTACACTGCAGGTTA +TAAAATTTGCAACTACCATTTGGCCACTCAGGAGGATTTGCAAAACGCAGTGAACGTCATGTGGAACAGA +GATCTTTTAGTTACAGAATCAAAAGCCCAGGGTACGGACTCGATTGCCAGGTGCAGTTGTAATGCAGGAG +TGTATTACTGCGAGTCCAGAAGGAAATACTACCCAATCTCCTTCGTCGGCCCCACTTTCCAGTATATGGA +GGCCAACGACTACTACCCAGCTAGATACCAATCCCATATGTTGATTGGGCATGGCTTTGCTTCGCCCGGC +GATTGTGGTGGTATCCTCAGGTGTCAACATGGTGTCATCGGGATTGTGACAGCTGGTGGAGAGGGTTTGG +TCGCGTTCTCTGACATAAGGGACCTATATGCTTATGAGGAGGAAGCTATGGAGCAGGGCATTACAAATTA +CATTGAGTCACTTGGCGCTGCATTCGGTAGCGGGTTCACCCAGCAAATAGGGGATAAGATATCAGAACTA +ACTAGCATGGTAACCAGCACAATCACAGAGAAACTACTAAAAAATCTAATCAAAATTATTTCATCTCTGG +TGATAATCACCAGAAATTATGAAGACACTACCACAGTGCTTGCCACTTTAGCTCTCCTTGGGTGTGACGT +TTCACCGTGGCAGTGGTTGAAGAAGAAGGCATGTGACATCTTGGAGATTCCCTATGTTATTAAACAGGGT +GATAGTTGGTTAAAGAAATTCACTGAGGCATGTAACGCAGCCAAGGGGTTGGAGTGGGTGTCCAACAAAA +TTTCAAAATTCATCGACTGGCTGAAGGAGAGAATCATCCCACAAGCCAGGGACAAGCTTGAATTTGTAAC +CAAATTGAAACAGTTGGAAATGCTTGAGAATCAAATATCCACAATACACCAGTCCTGCCCAAGTCAGGAA +CACCAGGAAGTTTTATTCAACAATGTACGCTGGTTGTCCATCCAATCTAAAAGATTCGCTCCATTATACG +CGCTCGAAGCCAAGAGAATACAAAAGCTGGAACACACCATTAATAACTACATACAGTTCAAGAGCAAACA +CCGTATTGAACCAGTATGTTTGTTGGTGCATGGGAGCCCAGGCACAGGGAAATCAGTTGCGACCAATCTG +ATTGCTAGGGCCATAGCTGAGAAAGAGAACACCTCCACTTACTCACTACCACCAGATCCGTCTCACTTTG +ATGGCTATAAACAACAAGGCGTGGTTATTATGGATGACCTGAACCAAAACCCAGACGGGGCAGACATGAA +GCTCTTCTGTCAAATGGTGTCCACTGTGGAGTTTATCCCACCTATGGCCTCACTGGAAGAAAAGGGCATT +TTGTTCACATCCAACTATGTCTTAGCCTCTACCAACTCCAGTCGTATCACACCACCCACAGTAGCTCACA +GTGACGCGCTGGCCCGGAGATTTGCTTTTGATATGGACATACAGGTGATGGGCGAATACTCCAGAGATGG +TAAACTCAATATGGCAATGGCTACAGAAATGTGCAAGAACTGCCACCAACCGGCAAACTTTAAAAGATGC +TGTCCTTTAGTGTGTGGTAAGGCAATTCAATTAATGGACAAATCTTCTAGAGTTAGATACAGTATTGATC +AGATCACTACAATGATTATCAATGAGAGAAACAGAAGATCCAACATTGGTAATTGCATGGAGGCTTTGTT +CCAAGGACCACTCCAATACAAAGACTTGAAAATTGATATCAAGACGAGTCCCCCTCCTGAATGTATTAAT +GATTTGCTCCAAGCAGTTGACTCCCAGGAAGTGAGGGATTATTGCGAAAAGAAAGGTTGGATCGTCAATA +TTACTAGTCAAGTGCAAACAGAGAGAAACATCAATCGAGCAATGACCATCTTGCAAGCAGTAACAACTTT +TGCTGCAGTGGCTGGTGTCGTGTATGTTATGTACAAGTTATTCGCTGGACACCAGGGAGCATACACTGGT +CTACCAAACAAAAGACCTAATGTGCCTACCATTAGAACAGCAAAAGTGCAAGGACCTGGGTTTGACTACG +CAGTGGCTATGGCTAAAAGAAACATTGTTACAGCAACTACTAGTAAAGGAGAGTTCACAATGCTGGGGGT +TCATGACAACGTGGCCATTTTACCAACTCATGCCTCACCTGGTGAGAGTATCGTGATTGATGGCAAAGAG +GTTGAGATTCTGGACGCTAAAGCCCTCGAAGACCAGGCAGGTACTAATCTGGAAATCACCATAATAACCC +TCAAAAGAAATGAAAAATTCAGAGATATCAGACCACATATACCCACTCAAATCACCGAGACGAATGATGG +AGTTCTGATTGTGAACACTAGTAAGTACCCCAATATGTATGTTCCTGTCGGTGCTGTGACTGAGCAGGGA +TATCTAAATCTCGGTGGACGCCAAACCGCTCGTACTTTAATGTACAACTTTCCAACCAGAGCAGGGCAGT +GTGGTGGAGTCATCACATGTACTGGGAAGGTCATCGGGATGCATGTTGGTGGGAACGGTTCACACGGGTT +TGCAGCGGCCCTGAAGCGATCATACTTCACTCAGAGTCAAGGTGAAATCCAGTGGATGAGACCATCGAAG +GAAGTGGGATACCCAATTATAAACGCCCCGTCCAAAACCAAGCTTGAACCCAGTGCTTTTCACTATGTAT +TTGAAGGAGTGAAGGAACCAGCAGTCCTTACCAAAAACGATCCCAGGCTTAAAACAGACTTTGAGGAGGC +AATTTTCTCCAAGTACGTGGGCAACAAGATCACTGAAGTGGATGAGTACATGAAAGAGGCAGTAGACCAC +TATGCTGGCCAACTCATGTCACTAGACATTGACACAGAACAGATGTGTTTGGAGGATGCCATGTATGGCA +CTGATGGTCTGGAAGCACTTGATTTATCCACTAGTGCTGGCTACCCTTATGTAACAATGGGAAAGAAGAA +AAGAGATATTTTAAACAAACAAACCAGGGACACCAAGGAAATGCAAAAACTCTTAGATACTTATGGAATC +AATTTACCGTTAGTAACGTATGTCAAAGATGAGCTAAGGTCTAAGACCAAAGTGGAGCAGGGAAAATCCA +GATTGATTGAAGCCTCCAGCTTAAATGATTCAGTAGCTATGAGAATGGCATTTGGAAATCTCTATGCAGC +ATTCCATAAAAACCCAGGAGTTATTACTGGCAGTGCAGTTGGTTGTGACCCAGATCTGTTCTGGAGCAAG +ATTCCAGTACTGATGGAAGAAAAGCTTTTCGCCTTTGACTATACAGGCTATGATGCATCACTCAGCCCAG +CTTGGTTTGAGGCACTCAAAATGGTATTGGAGAAAATTGGATTCGGGGACAGAGTGGACTACATTGACTA +CCTCAATCATTCACACCACTTGTACAAGAACAAAACATACTGTGTCAAGGGCGGCATGCCATCTGGCTGC +TCTGGCACCTCAATCTTCAACTCGATGATCAACAATCTGATCATTAGGACGCTTTTGCTAAAAACCTACA +AGGGCATAGACTTAGACCACCTAAAAATGATTGCCTATGGTGATGATGTAATCGCTTCCTACCCCCATGA +GGTTGACGCTAGTCTCCTAGCCCAATCAGGAAAAGACTATGGACTAACTATGACTCCAGCAGATAAATCT +GCCACTTTTGAAACAGTCACATGGGAGAATGTAACATTTTTGAAAAGATTCTTTAGAGCAGACGAGAAGT +ATCCATTTCTTATTCATCCAGTAATGCCAATGAAGGAAATTCATGAATCAATCAGATGGACCAAGGATCC +TAGAAACACACAGGATCACGTACGCTCTTTGTGCTTATTGGCTTGGCACAATGGAGAAGAAGAATACAAC +AAGTTCCTAGCTAAAATTAGGAGCGTGCCAATTGGAAGAGCCTTGCTGCTCCCAGAGTACTCAACATTGT +ACCGACGTTGGCTCGACTCGTTTTAGTAACCCTACCTCAGTCGAATTGGATTGGGTCATACTGTTGTAGG +GGTAAATTTTTCTTTAATTCGGGGA diff --git a/resources/rsvb/MT107528.1.fasta b/resources/rsvb/MT107528.1.fasta new file mode 100644 index 00000000..e3a25a29 --- /dev/null +++ b/resources/rsvb/MT107528.1.fasta @@ -0,0 +1,221 @@ +>MT107528.1 Human respiratory syncytial virus B isolate HRSV/B/Bern/2019, complete genome +TGACGAAACGGAGTCTAGACTCCGTCACGCGAAAAAATGCGTACTACAAACTTGCACACTCGAAAAAAAT +GGGGCAAATAAGAATTTGATAAGTGCTATTTAAGTCTAACCTTTTTAATCAGAAATGGGGTGCAATTCAC +TGAGCATGATAAAGGTTAGATTACAAAATTTGTTTGATAATGACGAAGTAGCATTGTTAAAAATAACATG +TTATACTGACAAATTAATTCTTCTGACTAATGCATTAGCCAAAGCAACAATACATACAATTAAATTAAAC +GGCATAGTTTTTATACATGTTATAACAAGCAGTGAAGTGTGCCCTGATAACAATATTGTAGTGAAATCTA +ACTTTACAACAATGCCAATATTACAAAATGGAGGATACATATGGGAATTGATTGAATTGACACACTGCTC +TCAATTAAATGGTCTAATAGATGATAATTGTGAAATCAAATTTTCTAAAAGACTAAGTGACTCAGTAATG +ACTGATTATATGAATCAAATATCTGATTTACTTGGGCTTGATCTCCATTCATGAATTATGTTTAGTCTAA +TTCAATAGACATGTGTTTATTACCATTTTAGTTAATATAAAACCTCATCAAAGGGAGATGGGGCAAATAA +ACTCACCCAATCAATCAAACCATGAGCACTACAAACGACAACACCACCATGCAAAGATTGATGATCACAG +ACATGAGACCCCTGTCGATGGATTCAATAATAACATCTCTCACCAAAGAAATCATCACACACAAATTCAT +ATACTTGATAAACAATGAATGTATTGTAAGAAAACTCGATGAAAGACAAGCTACATTTACATTCCTAGTC +AATTATGAGATGAAGCTATTGCACAAAGTAGGGAGTACCAAATACAAGAAATACACCGAATATAATACAA +AATATGGCACATTCCCTATGCCTATATTTATCAATCATGGCGGGTTTCTAGAATGTATTGGCATTAAGCC +TACAAAACATACTCCTATAATATACAAATATGACCTCAACCCGTAACTTCCAACAAAAAAACCAACTCAT +CCAAACCAAGCCATTCTCCAAACAACAATGCTCAACAGTTAAGAAGGAGCTAATCCATTTTAGTAATTAA +AAATAAGGGTGAAACCAGTAACATAAATTGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTGAA +TGATACATTAAATAAGGATCAGCTGCTGTCATCCAGCAAATACACTATTCAACGTAGTACAGGAGATAAT +ATTGACACTCCCAATTATGATGTGCAAAAACACCTAAACAAACTATGTGGTATGCTATTAATCACTGAAG +ATGCAAATCATAAATTCACAGGATTAATAGGTATGCTATATGCTATGTCCAGATTAGGAAGGGAAGACAC +TATAAAGATACTTAAAGATGCTGGATATCATGTTAAAGCTAATGGAGTAGATATAACAACATATCGTCAA +GATATAAATGGAAAGGAAATGAAATTCGAAGTATTAACATTATCAAGCTTGACATCAGAAATACAAGTCA +ATATTGAGATAGAATCTAGAAAGTCCTACAAAAAAATGCTAAAAGAGATGGGAGAAGTGGCTCCAGAATA +TAGGCATGATTCTCCAGACTGTGGGATGATAATACTGTGTATAGCTGCCCTTGTAATAACCAAATTAGCA +GCAGGAGATAGATCAGGTCTTACAGCAGTAATTAGGAGGGCAAACAATGTCTTAAAAAACGAAATAAAAC +GCTACAAGGGCCTAATACCAAAAGACATAGCCAACAGTTTTTATGAAGTGTTTGAAAAATACCCTCATCT +TATAGATGTTTTTGTGCACTTTGGCATAGCACAATCATCCACAAGAGGGGGCAGTAGAGTTGAAGGAATC +TTTGCAGGATTGTTTATGAATGCCTATGGTTCAGGACAAGTAATGCTAAGATGGGGAGTTTTAGCCAAAT +CTGTAAAAAATATCATGCTAGGACATGCTAGTGTCCAAGCAGAAATGGAGCAAGTTGTGGAAGTCTATGA +GTATGCACAGAAGTTGGGAGGAGAAGCTGGTTTCTACCATATATTGAACAATCCAAAAGCATCATTGCTG +TCATTAACTCAATTTCCTAACTTCTCAAGTGTGGTCCTAGGCAATGCAGCAGGTCTAGGCATAATGGGAG +AGTATAGAGGTACACCAAGAAACCAAGATCTCTATGATGCAGCCAAAGCATATGCAGAGCAACTCAAAGA +AAATGGAGTAATAAACTACAGTGTATTAGACTTAACAACAGAAGAATTGGAAGCCATAAAGCATCAACTC +AACCCCAAAGAAGATGACGTAGAGCTTTAAGTTAACAAAAAATACGGGGCAAATAAGTCAACATGGAGAA +GTTTGCACCTGAATTTCATGGAGAAGACGCAAATAACAAAGCTACCAAATTCCTAGAATCAATAAAAGGC +AAGTTCGCATCATCCAAAGATCCTAAGAAGAAAGATAGCATAATATCTGTCAACTCAATAGACATAGAAG +TCACTAAAGAGAGCCCGATAACATCTGGCACCAACATTATCAATCCAACAAGTGAAGCCGACAGTACCCC +AGAAACTAAAGCCAACTACCCAAGAAAACCTCTAGTAAGCTTCAAAGAAGATCTCACCCCAAGTGATAAC +CCTTTCTCTAAGTTGTACAAAGAAACCATAGAAACATTTGATAACAATGAAGAAGAATCTAGCTACTCAT +ATGAGGAGATCAATGACCAAACAAATGACAACATTACAGCAAGACTAGATAGAATTGATGAAAAATTAAG +TGAAATATTAGGAATGCTCCATACATTAGTAGTTGCAAGTGCAGGACCTACTTCGGCTCGTGACGGAATA +AGAGATGCTATGGTTGGTCTAAGAGAAGAAATGATAGAAAAAATAAGAGCAGAAGCATTAATGACCAATG +ATAGGTTAGAGGCCATGGCAAGACTTAGGAATGAGGAAAGTGAAAAAATGGCAAAAGACACCTCAGATGA +AGTGTCTCTCAATCCAACCTCTAAAAAATTGAGTGACTTGTTGGAAGACAACGATAGCGACAATGATCTA +TCACTTGATGATTTTTGATCAGTGATCAACTCACTCAGCAATCAACAACATCAATAAAACAGACACCAAT +CCATTGAATCAATTGCCAGACTGAAAAAACAAACATCCATCAGCAGAACCACCAACCAATCAATCAACCA +ATTGATCAATCAGCACCCTGACAAAATTAACAATATAGTAACAAAAAAAGAACAAGATGGGGCAAATATG +GAAACATACGTGAACAAGCTTCACGAAGGCTCCACATACACAGCAGCTGTCCAGTACAATGTTCTAGAAA +AAGATGATGATCCCGCATCACTAACAATATGGGTGCCTATGTTCCAGTCATCTGTGCCAGCAGACTTGCT +CATAAAAGAACTTGCAAGCATCAACATACTAGTAAAGCAGATCTCTACGCCCAAAGGACCTTCACTACGA +GTCACGATCAACTCAAGAAGTGCTGTGCTGGCTCAAATGCCTAGTAATTTCACCATAAGTGCAAATGTAT +CATTAGATGAAAGAAGCAAATTAGCATATGATGTAACTACACCTTGTGAAATCAAAGCATGCAGTTTAAC +ATGCTTAAAAGTAAAAAGTATGTTAACTACAGTCAAAGATCTAACCATGAAGACATTCAACCCCACTCAT +GAGATCATTGCTCTATGTGAATTTGAAAATATTATGACATCAAAAAGAGTAATAATACCAACCTATCTAA +GATCAATCAGTGTCAAAAACAAAGATCTGAACTCACTGGAAAATATAGCAACCACCGAATTCAAAAATGC +TATCACCAATGCTAAAATTATTCCCTATGCAGGATTAGTGTTAGTTATCACGGTTACTGATAATAAAGGA +GCATTCAAGTATATCAAGCCACAGAGTCAATTTATAGTGGATCTTGGTGCCTACCTAGAAAAAGAGAGCA +TATATTATGTGACTACTAATTGGAAGCATACAGCTACACGTTTTTCAATCAAACCACTAGAGGATTAAAC +TCAATTATCAACATTGAATGACAGGTTCACATATATCCTCAACTGCACACTATATCTAAACATCATAAAC +ATCTACACTACACACTTCATCACACAAACCAATCCCACTCAAAATCTAAAATCACTTCCAGCCATTGTCT +GCCAGACCTAGAGTGCGAATAGGTAAATAAAACAAGAATATGGGGTAAATAGATATCAGTTAGAGTTCAA +CCAATCTCAACAACCATCTATACCGCCAATCCAATACATACATTGCAAATCTTAAAATGGGAAACACATC +CATCACAATAGAATTCACAAGCAAATTTTGGCCCTATTTTACACTAATACATATGATCTTAACTCTAATC +TCTTTACTAATTATAATCACTATTATGATTGCAATACTAAATAAGCTAAGTGAACATAAAATATTCTGCA +ACAAAACTCTTGAACAAGGACAGATGTATCAAATCGACACATAGTGTTCTCCCATTATGCTGTATCAAAT +CACAATCCTGTGTATATAAATAAACAAATCCAATCTTCTCACAGAGTCATGGCATCACAAAACCATGCCA +ACCATCATGGTAGCATAGAGTAGTTATTAAAAATTAACATAATGATGAATTATTAGTATGGGATCAAAAA +CAACATTGGGGCAAATGCAACAATGTCCAAAAACAAGAATCAACGCACTGCCAGGACTCTAGAAAAGACC +TGGGATACTCTTAATCATCTAATTGTAATATCCTCTTGTTTATACAAATTAAATTTAAAATCTATAGCAC +AAATAGCACTATCAGTTTTGGCAATGATAATCTCAACCTCTCTTATAATTGCAGCCATAATATTCATCAT +CTCTGCCAATCACAAAGTTACACTAACAACTGTCACAGTTCAAACAATAAAAAACCACACTGAGAAAAAC +ATAACCACTTACCTCACTCAAGTCTCACCAGAAAGGGTTAGCCCATCCAAACAACCCACAGCCACACCAC +CAATCCACACAAACTCAGCCACAATATCACCCAATACAAAATCAGAAACACACCATACAACAACACAAAC +CAAAGGCACAATCTCTACTCCAACACAGAACAACAAGCCAAGCACAAAACCACGTCCAAAAAATCCACCA +AAAAAAGATGATTACCATTTTGAAGTGTTCAACTTTGTTCCCTGTAGTATATGTGGCAACAATCAACTCT +GCAAATCCATTTGCAAAACAATACCAAGCAATAAACCAAAGAAAAAACCAACTACAAAACCCACAAACAA +ACCACCTACCAAAACCACAAACAAAAGAGACCCCAAAACACTAGCCAAAACACCGAAAAAAGAAACCACC +ATTAACCCAACAAAAAAACCAACCCCCAAGACTACAGAAAGAGACACCAGCACCCCACAATCCACTGTGC +TCGACATAACCACATCAAAACACACAGAAAGGGACACCAGCACCTCACAATCCATTGCGCTTGACACAAC +CACATCAAAACACACAACCCAACAGCAATCTCTCTACTCAACCATCCCCGAAAACACACCCAACTCCACA +CAAACACCCACAGCATCCGAGCCCTCCACATCAAATTCTATCTAAAGACTCCAGTCATATGCTTAGTTAT +TTAAAAACTACATCTTAGCAAAGAACCGTGATCCCTCAAGCAAGAACGAAATTAAATCTGGGGCAAATAA +CCATGGAGTTGCTGATCCATAGATCAAGTGCAATCTTCCTAACTCTTGCTATTAATGCATTGTACCTTAC +CTCAAGTCAGAACATAACTGAGGAGTTTTACCAATCAACATGTAGTGCAGTTAGCAGAGGTTACTTGAGT +GCTTTAAGAACAGGTTGGTATACCAGTGTCATAACAATAGAATTAAGTAATATAAAAGAAACCAAATGCA +ATGGAACTGACACTAAAGTTAAACTTATAAAACAAGAATTAGATAAGTATAAGAATGCAGTAACTGAATT +ACAGTTACTTATGCAAAACACACCAGCTGTCAACAACCGGGCCAGAAGAGAAGCACCACAGTATATGAAC +TACACAATCAATACCACTAAAAACCTAAATGTATCAATAAGCAAGAAGAGGAAACGAAGATTTCTGGGCT +TCTTGTTAGGTGTAGGATCTGCAATAGCAAGTGGTATAGCTGTATCCAAAGTTCTACACCTTGAAGGAGA +AGTGAACAAGATCAAAAATGCTTTGCAGCTTACAAACAAAGCTGTAGTCAGTCTATCAAATGGGGTCAGT +GTTTTAACCAGCAGAGTGTTAGATCTCAAGAATTATATAAACAACCAATTATTACCTATGGTAAATCGAC +AGAGTTGTCGCATATCCAACATTGAGACAGTTATAGAATTCCAGCAGAAGAACAGCAGATTGTTGGAAAT +CACCAGAGAATTTAGTGTCAATGCAGGTGTAACGACACCTTTAAGCACTTACATGTTAACAAACAGTGAG +TTACTATCATTAATCAATGATATGCCTATAACAAATGATCAGAAAAAATTAATGTCAAGCAATGTTCAGA +TAGTAAGGCAACAAAGTTATTCTATCATGTCTATAATAAAGGAAGAAGTTCTTGCATATGTTGTACAGCT +ACCTATCTATGGTGTAATTGATACACCTTGCTGGAAATTACACACATCACCTCTGTGCACCACCAACATC +AAAGAAGGATCAAATATTTGTTTAACAAGGACTGATAGAGGATGGTATTGTGATAATGCAGGATCAGTAT +CCTTCTTTCCACAAGCTGACACTTGTAAAGTACAGTCCAATCGAGTATTTTGTGACACTATGAACAGTTT +GACATTACCAAGTGAAGTCAGCCTTTGTAACACTGACATATTCAATTCCAAGTATGACTGCAAAATTATG +ACATCAAAAACAGACATAAGCAGCTCAGTAATTACTTCTCTAGGAGCTATAGTGTCATGCTATGGTAAGA +CTAAATGTACTGCATCCAACAAAAATCGTGGAATTATAAAGACATTTTCTAATGGTTGTGATTATGTGTC +AAACAAAGGAGTAGATACTGTATCAGTGGGCAACACTCTATATTATGTCAACAAGCTGGAAGGCAAAAAC +CTTTATGTAAAAGGGGAACCTATAATAAATTACTATGACCCTCTAGTGTTTCCTTCTGATGAGTTTGATG +CATCAATATCTCAAGTCAATGAAAAAATTAATCAAAGTTTAGCTTTTATTCGTAGATCTGATGAATTATT +ACATAATGTAAATACTGGAAAATCTACTACAAATATTATGATAACTGCAATTATTATAGTAATCATTGTA +GTATTGTTATCATTAATAGCTATTGGTTTACTGTTGTATTGCAAAGCCAAAAACACACCAGTTACATTAA +GCAAAGACCAACTAAGTGGAATCAATAATATTGCATTCAGCAAATAGACAAAAAACCACCTGATCATGTT +CCAACAACAATCTGCTGACCATCAATCCCAAATCAACTTACAACAGATACTTCAACATCACAGCACAGGC +TGAATCATCTCCTCGCATCATGCTACCCACACAACTAAGCTAGATCCTTAATTCATAGTTACATAAAAGC +CTCAAATATCGCAATCAACACTAAATCAACACATCATTCACAAAACTAACAGCTGGGGCAAATATGTCGC +GAAGAAATCCCTGCAAATTTGAGATTAGAGGTCATTGCTTGAATGGTAGAAGATGCCACTACAGTCATAA +TTACTTTGAATGGCCTCCTCATGCATTGCTAGTGAGGCAAAACTTCATGTTAAACAAGATACTCAAGTCA +ATGGACAAGAGCATAGACACTTTGTCTGAAATAAGTGGAGCTGCTGAACTTGATAGAACAGAAGAATATG +CTCTTGGTATAGTTGGAGTGCTAGAGAGTTACATAGGATCTATAAACAACATAACAAAACAATCAGCATG +TGTTGCTATGAGTAAACTTCTTATTGAGATCAATAGTGATGACATTAAAAAGCTGAGAGATAATGAAGAA +CCCAATTCACCTAAGATAAGAGTGTACAATACTGTTATATCATACATCGAGAGCAATAGAAAAAACAGCA +AGCAAACCATCCATCTGCTTAAACGATTACCAGCAGACGTGCTGAAGAAGACAATAAAGAACACATTAGA +TATCCACAAAAGCATAACCATAAGCAACCCAAAAGAGTCAACCATAAGTGATCAAAATGACCAAACCAAA +AATAATGATATTACCGGATAAATATCCTTGTAGTATATCATCCATATTGATCTCAAGTGAAAGCATGATT +GCTACATTCAATCATAAAGACATATTACAATTTAACCACAACCATTTAGATAACCACCAGTGTTTATTAA +ATCATATATTTGATGAAATTCATTGGACACCTAAAAACTTATTAGATGCCACTCAACAATTTCTCCAACA +TCTTAACATCCCTGAAGATATATATACAGTATATATATTAGTGTCATAATGCTTGATCATAGCGACTCTA +TATCATCCAACCATAAATTAGTCTTAATAAAGTTATGGGACAAAATGGATCCCATTATTAATGGAAGCTC +CGCTAATGTATATCTAACTGATAGTTATCTAAAAGGTGTTATCTCTTTTTCAGAATGTAATGCTTTAGGG +AGTTACCTTTTTAACGGCCCTTATCTTAAAAATGATTATACCAACTTAATTAGTAGACAAAGCCCACTAA +TAGAGCATATGAATCTAAAAAAACTAACTATAACACAGTCATTAATATCTAGATACCATAAAGGCGAACT +GAAATTAGAAGAACCAACTTATTTCCAGTCATTACTTATGACATATAAAAGCATGTCCTCGTCTGAACAA +ATTGCTACAACTAACTTACTTAAAAAAATAATACGAAGAGCTATAGAAATAAGTGATGTAAAGGTGTACG +CCATCTTGAATAAACTAGGACTAAAGGAAAAGGACAGAGTTAAGCCCAACAACAATTCAGGTGATGAAAA +CTCAGTACTTACAACCATAATTAAAGATGATATACTCTCAGCTGTGGAAAACAATCAATCATATACAAAT +TCAGATAAAAATTACTCAGTAAATCAAAATATCAATATCAAAACAACACTCTTAAAAAAGTTGATGTGTT +CAATGCAACATCCTCCATCATGGTTAATACACTGGTTCAATTTATATACAAAATTAAATAACATATTAAC +ACAATATCGATCAAATGAGGTAAAAAGTCATGGGTTTATATTAATAGATAATCAAACTTTGAGTGGTTTT +CAGTTTATTTTAAATCAATATGGTTGCATTGTTTATCATAAAGGGCTCAAAAAAATTACAACTACTACAT +ACAATCAATTTTTGACATGGAAAGACATCAGCCTCAGCAGATTAAATGTTTGCTTAATTACTTGGATAAG +TAATTGTTTAAATACATTAAATAAAAGCTTAGGGTTGAGATGCGGATTCAATAATGTTGTGCTATCACAA +TTATTCCTTTACGGAGATTGTATACTGAAATTATTTCATAATGAAGGATTTTACATAATAAAAGAAGTAG +AAGGATTTATTATGTCTTTAATTCTAAACATAACAGAAGAAGATCAATTTAGGAAACGATTTTATAATAG +CATGCTAAATAACATCACAGATGCAGCTATTAAGGCTCAAAAGGATCTACTATCAAGAGTATGTCACACT +TTATTAGACAAGACAGTGTCTGATAATATCATAAATGGTAAATGGATAATTCTATTAAGTAAATTTCTTA +AATTGATTAAGCTTGCAGGTGATAATAATCTCAATAACTTGAGTGAGCTATATTTTCTCTTCAGAATCTT +TGGACATCCAATGGTTGATGAAAGACAAGCAATGGATGCTGTAAGAATTAACTGCAATGAAACTAAGTTC +TATTTATTAAGTAGCCTAAGTACGTTGAGAGGTGCTTTCATTTATAGAATCATAAAAGGGTTTGTAAATA +CCTACAATAGATGGCCCACTTTAAGGAATGCTATTGTCCTACCTCTAAGATGGTTAAACTATTATAAACT +TAATACTTATCCATCTCTACTTGAAATCACAGAAAATGATTTGATTATTTTATCAGGATTGCGGTTCTAT +CGTGAGTTTCATCTGCCTAAAAAAGTGGATCTTGAAATGATAATAAATGACAAAGCTATTTCTCCTCCAA +AAGATCTAATATGGACTAGTTTTCCTAGAAATTACATGCCATCACATATACAAAATTATATAGAACATGA +AAAGTTGAAGTTCTCTGAAAGCGACAGATCAAGAAGAGTACTAGAGTATTACTTGAGAGATAATAAATTC +AATGAATGTGATCTATACAATTGTGTAGTTAATCAAAGCTATCTCAACAACTCTAATCATGTGGTATCAC +TAACTGGTAAAGAAAGAGAGCTCAGTGTGGGTAGAATGTTTGCTATGCAACCAGGTATGTTTAGGCAAAT +CCAAATCTTAGCAGAAAAAATGATAGCTGAAAATATTTTACAATTCTTCCCTGAGAGTTTGACAAGATAT +GGTGATCTAGAGCTTCAAAAGATATTAGAATTAAAAGCAGGAATAAGCAACAAGTCAAATCGTTATAATG +ATAACTACAACAATTATATCAGTAAATGTTCTATAATAACAGATCTTAGCAAATTTAATCAAGCATTTAG +ATATGAAACATCATGTGTCTGCAGTGATGTATTAGATGAACTGCATGGGGTACAATCTCTATTCTCTTGG +TTGCATTTAACAATACCTCTTGTCACAATAATATGTACATATAGACATGCACCTCCTTTTATAAAGGATC +ATGTTGTCAATCTTAATGAAGTTGATGAACAAAGTGGGTTATACAGATATCATATGGGTGGTATTGAGGG +CTGGTGTCAAAAACTGTGGACCATTGAAGCCATATCATTATTAGATCTAATATCTCTTAAAGGTAAATTC +TCCATCACAGCTCTGATAAATGGTGATAATCAGTCAATTGATATAAGTAAACCAGTTAGACTTATAGAGG +GTCAGACCCATGCTCAAGCAGATTATTTGTTAGCATTAAATAGCCTTAAGTTGCTATATAAAGAGTATGC +AGGCATAGGCCATAAGCTTAAGGGAACCGAGACCTATATATCTCGAGATATGCAGTTCATGAGCAAAACA +ATCCAGCACAATGGAGTGTACTATCCAGCCAGTATCAAAAAAGTCCTGAGAGTAGGTCCATGGATAAATA +CAATACTTGATGATTTTAAAGTTAGTTTAGAATCTATAGGTAGCTTAACACAGGAGTTAGAATACAGAGG +AGAAAGCTTATTATGCAGTTTAATATTTAGGAATATTTGGTTATACAATCAAATTGCTCTGCAACTCCGG +AATCATGCTTTATGTAATAATAAGCTATATTTAGATATATTGAAAGTATTAAAACACTTAAAAACCTTTT +TTAATCTTGATAGTATCGATACGGCATTATCATTGTATATGAACTTGCCTATGCTGTTTGGTGGTGGTGA +TCCTAATTTGTTATATCGAAGCTTTTATAGGAGAACTCCAGACTTCCTTACAGAAGCTATAGTACATTCA +GTGTTTGTGTTGAGCTATTATACTGGTCACGATCTACAAGATAAGCTCCAGGATCTTCCAGATGATAGAC +TGAACAAATTCTTGACTTGTGTCATCACATTTGATAAAAATCCAAATGCCGAGTTTGTAACATTGATGAG +GGATCCACAGGCTTTAGGGTCTGAAAGGCAAGCTAAAATTACTAGTGAGATTAATAGATTAGCAGTAACA +GAAGTCTTAAGTATAGCTCCAAACAAAATATTTTCTAAAAGTGCGCAACACTATACTACCACTGAGATTG +ATCTAAATGACATTATGCAAAATATAGAACCAACTTACCCTCATGGATTAAGAGTTGTTTATGAAAGTTT +ACCTTTTTATAAAGCAGAAAAAATAGTTAATCTTATATCAGGAACAAAATCCATAACTAATATACTTGAA +AAAACATCAGCGATAGATACAACTGATATTAATAGGGCTACTGATATGATGAGGAAAAATATAACCTTAC +TTATAAGGATACTTCCACTAGATTGTAACAAAGACAAAAGAGAGTTATTAAGTTTAGAAAATCTTAGCAT +AACTGAATTAAGCAAGTATGTAAGAGAAAGATCTTGGTCATTATCCAATATAGTAGGAGTAACATCACCA +AGTATTATGTTCACAATGGACATTAAATATACAACTAGCACTATAGCCAGTGGTATAATTATAGAAAAAT +ATAATGTTAATGGTTTAACTCGTGGTGAAAGAGGACCTACTAAGCCATGGGTAGGTTCATCTACACAAGA +GAAAAAAACAATGCCAGTGTACAATAGACAAGTTTTAACCAAAAAGCAAAGAGACCAAATAGATTTATTA +GCAAAATTAGACTGGGTATATGCATCCATAGACAACAAAGATGAATTCATGGAAGAACTGAGTACTGGAA +CACTTGGACTGTCATATGAAAAGGCCAAAAAGTTGTTTCCACAATATCTAAGTGTCAATTATTTACACCG +GTTAACAGTCAGTAGTAGACCATGCGAATTCCCTGCCTCAATACCAGCTTATAGAACAACAAATTATCAT +TTTGATACTAGTCCTATCAATCATGTATTAACAGAAAAGTATGGAGATGAAGATATCGACATTGTGTTTC +AAAATTGCATAAGTTTTGGTCTTAGCTTGATGTCAGTTGTGGAACAATTCACAAACATATGTCCTAATAG +AATTATTCTCATACCGAAGCTGAATGAGATACATTTGATGAAACCTCCTATATTTACAGGAGATGTTGAT +ATCATCAAGTTGAAGCAAGTGATACAAAAACAGCATATGTTCCTACCAGATAAAATAAGTTTAACCCAAT +ATGTAGAATTATTCTTAAGTAACAAAGCACTTAAATCTGGATCTCACATCAACTCTAATTTAATATTAGC +ACATAAAATGTCTGATTATTTTCATAATGCGTATATTTTAAGTACTAATTTAGCTGGACATTGGATTCTG +ATTATTCAACTTATGAAAGATTCAAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGGTATATAACTGATC +ATATGTTCATTAATTTGAATGTTTTCTTTAATGCTTATAAGACTTATTTGCTATGTTTTCATAGAGGTTA +TGGTAAAGCAAAATTAGAATGTGATATGAACACTTCAGATCTTCTTTGTGTTTTGGAGTTAATAGACTGT +AGCTACTGGAAATCTATGTCTAAAGTTTTCCTAGAACAAAAAGTCATAAAATACATAGTCAATCAAGACA +CAAGTTTGCATAGAATAAAAGGTTGTCACAGTTTTAAGTTGTGGTTTTTAAAACGCCTTAATAATGCTAA +ATTTACCGTATGCCCTTGGGTTGTTAACATAGATTATCACCCAACACACATGAAAGCTATATTATCTTAC +ATAGATTTAGTTAGAATGGGGTTAATAAATGTAGATAAATTAACCATTAAAAATAAAAACAAATTCAATG +ATGAATTTTACACATCAAATCTCTTTTACATTAGTTACAACTTTTCAGACAACACTCATCTGCTAACAAA +ACAAATAAGGATTGCTAATTCAGAATTAGAAGATAATTATAACAAACTATATCACCCAACCCCAGAAGCT +TTAGAAAATGTATCATTAATCCCTGTTAAAAGTAATAATAGAAACAAACCTAAATTTTGTATAAGTGGAA +GTACTGAATCTATGATGACGTCAACATTCTCTAATAAAATGCATATTAAATCTTCCACTGTTACCACAAG +ATTCAATTATAGCAGACAAGACTTGTACAATTTATTTCCAATTGTTGTGATAGACAGGATTATAGATCAT +TCAGGTAATACAGAAAAATCTAACCAACTTTACACCACCACTTCACATCAGACATCTTTAGTAAGGAACA +GTGCATCACTTTATTGCATGCTTCCTTGGCATCATGTCAATAGATTTAACTTTGTATTTAGTTCCACAGG +ATGCAAGATCAGTATAGAATATATTTTAAAAGATCTTAAGATTAAAGATCCCAGTTGCATAGCATTCATA +GGTGAAGGAGCTGGTAACTTATTATTACGTACGGTAGTAGAACTTCATCCTGACATAAGATATATTTACA +GAAGTTTAAAAGATTGCAATGATCATAGTTTACCTATTGAATTTCTAAGGTTATACAACGGGCATATAAA +CATAGATTATGGTGAGAATTTAACCATTCCTGCTACAGATGCAACTAACAACATACATTGGTCTTATTTA +CACATAAAATTTGCAGAACCTATTAGTATCTTTGTCTGTGATGCTGAATTACCTGTCACAGCCAATTGGA +GTAAGATCATAATTGAATGGAGTAAGCATGTAAGAAAGTGCAAATACTGTTCTTCTGTAAATAGATGCAT +TTTAATTGCAAAATACCATGCTCAAGATGATATTGATTTCAAATTAGATAACATTACTATATTAAAAACT +TATGTGTGCCTAGGTAGCAAGTTAAAAGGATCTGAAGTTTACTTAGTCCTTACAATAGGCCCTGCAAATA +TACTTCCTGTTTTTGATGTTGTGCAAAATGCTAAATTGATTCTTTCAAGAACTAAAAATTTCATTATGCC +TAAAAAGATTGACAAGGAATCTATCGATGCAAATATTAAAAGCTTAATACCTTTCCTTTGTTACCCTATA +ACAAAAAATGGAATTAAGACTTCATTGTCAAAATTGAAGAGTGTAGTTAATGGAGATATATTATCATATT +CTATAGCTGGACGTAATGAAGTATTCAGCAACAAGCTTATAAACCACAAGCATATGAATATCTTAAAATG +GCTGGATCATGTTTTAAACTTTAGATCAGCTGAACTTAATTACAATCATTTATACATGATAGAGTCCACA +TATCCTTACTTGAGTGAATTATTAAATAGTTTAACAACCAATGAGCTCAAGAAGCTGATTAAAATAACAG +GTAGTGTACTATACAACCTTCCTAATGAACAGTAACTTAAAATATCATTAACAAGTTTGGTCAAATTTAG +ATGCTAACACATTATTATATTATAGTTATTAAAAAATATGCAAACTTTTCAATAATTTAGCATATTGATT +CCAAAATTATCATTTTAGTCTTAAGGGATTAAATAAAAGTCTAAAACTAACAATCACACATGTGCATTTA +CAACACAACGAGACATTAGTTTTTGACACTTTTTTTCTCGTGGCCGGCATG + diff --git a/resources/rsvb/RSVB_inserts_400_V2.1.bed b/resources/rsvb/RSVB_inserts_400_V2.1.bed new file mode 100644 index 00000000..26a46911 --- /dev/null +++ b/resources/rsvb/RSVB_inserts_400_V2.1.bed @@ -0,0 +1,51 @@ +MT107528.1 141 519 scheme_INSERT_1 pool1 + +MT107528.1 434 813 scheme_INSERT_2 pool2 + +MT107528.1 763 1147 scheme_INSERT_3 pool1 + +MT107528.1 1022 1385 scheme_INSERT_4 pool2 + +MT107528.1 1335 1713 scheme_INSERT_5 pool1 + +MT107528.1 1666 2046 scheme_INSERT_6 pool2 + +MT107528.1 1995 2370 scheme_INSERT_7 pool1 + +MT107528.1 2257 2628 scheme_INSERT_8 pool2 + +MT107528.1 2580 2941 scheme_INSERT_9 pool1 + +MT107528.1 2758 3136 scheme_INSERT_10 pool2 + +MT107528.1 3085 3467 scheme_INSERT_11 pool1 + +MT107528.1 3420 3803 scheme_INSERT_12 pool2 + +MT107528.1 3695 4067 scheme_INSERT_13 pool1 + +MT107528.1 3981 4358 scheme_INSERT_14 pool2 + +MT107528.1 4144 4515 scheme_INSERT_15 pool1 + +MT107528.1 4483 4862 scheme_INSERT_16 pool2 + +MT107528.1 4847 5214 scheme_INSERT_17 pool1 + +MT107528.1 5136 5459 scheme_INSERT_18 pool2 + +MT107528.1 5466 5848 scheme_INSERT_19 pool1 + +MT107528.1 5819 6204 scheme_INSERT_20 pool2 + +MT107528.1 6046 6409 scheme_INSERT_21 pool1 + +MT107528.1 6326 6705 scheme_INSERT_22 pool2 + +MT107528.1 6553 6934 scheme_INSERT_23 pool1 + +MT107528.1 6894 7259 scheme_INSERT_24 pool2 + +MT107528.1 7068 7433 scheme_INSERT_25 pool1 + +MT107528.1 7393 7775 scheme_INSERT_26 pool2 + +MT107528.1 7721 8114 scheme_INSERT_27 pool1 + +MT107528.1 7918 8284 scheme_INSERT_28 pool2 + +MT107528.1 8257 8622 scheme_INSERT_29 pool1 + +MT107528.1 8500 8869 scheme_INSERT_30 pool2 + +MT107528.1 8814 9183 scheme_INSERT_31 pool1 + +MT107528.1 9087 9476 scheme_INSERT_32 pool2 + +MT107528.1 9421 9808 scheme_INSERT_33 pool1 + +MT107528.1 9768 10135 scheme_INSERT_34 pool2 + +MT107528.1 10080 10451 scheme_INSERT_35 pool1 + +MT107528.1 10409 10777 scheme_INSERT_36 pool2 + +MT107528.1 10728 11101 scheme_INSERT_37 pool1 + +MT107528.1 11031 11405 scheme_INSERT_38 pool2 + +MT107528.1 11361 11730 scheme_INSERT_39 pool1 + +MT107528.1 11555 11936 scheme_INSERT_40 pool2 + +MT107528.1 11893 12262 scheme_INSERT_41 pool1 + +MT107528.1 12218 12603 scheme_INSERT_42 pool2 + +MT107528.1 12539 12920 scheme_INSERT_43 pool1 + +MT107528.1 12871 13256 scheme_INSERT_44 pool2 + +MT107528.1 13240 13616 scheme_INSERT_45 pool1 + +MT107528.1 13458 13829 scheme_INSERT_46 pool2 + +MT107528.1 13671 14059 scheme_INSERT_47 pool1 + +MT107528.1 14018 14399 scheme_INSERT_48 pool2 + +MT107528.1 14324 14705 scheme_INSERT_49 pool1 + +MT107528.1 14640 15029 scheme_INSERT_50 pool2 + +MT107528.1 14888 15236 scheme_INSERT_51 pool1 + diff --git a/resources/rsvb/RSVB_primers_400_V2.1.bed b/resources/rsvb/RSVB_primers_400_V2.1.bed new file mode 100644 index 00000000..0e198a2d --- /dev/null +++ b/resources/rsvb/RSVB_primers_400_V2.1.bed @@ -0,0 +1,103 @@ +MT107528.1 118 141 scheme_1_LEFT pool1 + +MT107528.1 519 541 scheme_1_RIGHT pool1 - +MT107528.1 738 763 scheme_3_LEFT pool1 + +MT107528.1 1147 1169 scheme_3_RIGHT pool1 - +MT107528.1 1308 1335 scheme_5_LEFT pool1 + +MT107528.1 1713 1738 scheme_5_RIGHT pool1 - +MT107528.1 1972 1995 scheme_7_LEFT pool1 + +MT107528.1 2370 2392 scheme_7_RIGHT pool1 - +MT107528.1 2558 2580 scheme_9_LEFT pool1 + +MT107528.1 2941 2963 scheme_9_RIGHT pool1 - +MT107528.1 3060 3085 scheme_11_LEFT pool1 + +MT107528.1 3467 3489 scheme_11_RIGHT pool1 - +MT107528.1 3668 3695 scheme_13_LEFT pool1 + +MT107528.1 4067 4092 scheme_13_RIGHT pool1 - +MT107528.1 4114 4144 scheme_15_LEFT pool1 + +MT107528.1 4515 4540 scheme_15_RIGHT pool1 - +MT107528.1 4818 4847 scheme_17_LEFT pool1 + +MT107528.1 5214 5238 scheme_17_RIGHT pool1 - +MT107528.1 5445 5466 scheme_19_LEFT pool1 + +MT107528.1 5848 5871 scheme_19_RIGHT pool1 - +MT107528.1 6020 6046 scheme_21_LEFT pool1 + +MT107528.1 6409 6431 scheme_21_RIGHT pool1 - +MT107528.1 6523 6553 scheme_23_LEFT pool1 + +MT107528.1 6934 6959 scheme_23_RIGHT pool1 - +MT107528.1 7040 7068 scheme_25_LEFT pool1 + +MT107528.1 7433 7461 scheme_25_RIGHT pool1 - +MT107528.1 7698 7721 scheme_27_LEFT pool1 + +MT107528.1 8114 8136 scheme_27_RIGHT pool1 - +MT107528.1 8231 8257 scheme_29_LEFT pool1 + +MT107528.1 8622 8655 scheme_29_RIGHT pool1 - +MT107528.1 8782 8814 scheme_31_LEFT pool1 + +MT107528.1 9183 9209 scheme_31_RIGHT pool1 - +MT107528.1 9399 9421 scheme_33_LEFT pool1 + +MT107528.1 9808 9834 scheme_33_RIGHT pool1 - +MT107528.1 10047 10080 scheme_35_LEFT pool1 + +MT107528.1 10451 10474 scheme_35_RIGHT pool1 - +MT107528.1 10698 10728 scheme_37_LEFT pool1 + +MT107528.1 11101 11130 scheme_37_RIGHT pool1 - +MT107528.1 11334 11361 scheme_39_LEFT pool1 + +MT107528.1 11730 11754 scheme_39_RIGHT pool1 - +MT107528.1 11870 11893 scheme_41_LEFT pool1 + +MT107528.1 12262 12292 scheme_41_RIGHT pool1 - +MT107528.1 12516 12539 scheme_43_LEFT pool1 + +MT107528.1 12920 12949 scheme_43_RIGHT pool1 - +MT107528.1 13213 13240 scheme_45_LEFT pool1 + +MT107528.1 13616 13642 scheme_45_RIGHT pool1 - +MT107528.1 13642 13671 scheme_47_LEFT pool1 + +MT107528.1 14059 14081 scheme_47_RIGHT pool1 - +MT107528.1 14302 14324 scheme_49_LEFT pool1 + +MT107528.1 14705 14732 scheme_49_RIGHT pool1 - +MT107528.1 409 434 scheme_2_LEFT pool2 + +MT107528.1 813 841 scheme_2_RIGHT pool2 - +MT107528.1 992 1022 scheme_4_LEFT pool2 + +MT107528.1 1385 1413 scheme_4_RIGHT pool2 - +MT107528.1 1643 1666 scheme_6_LEFT pool2 + +MT107528.1 2046 2068 scheme_6_RIGHT pool2 - +MT107528.1 2228 2257 scheme_8_LEFT pool2 + +MT107528.1 2628 2651 scheme_8_RIGHT pool2 - +MT107528.1 2732 2758 scheme_10_LEFT pool2 + +MT107528.1 3136 3161 scheme_10_RIGHT pool2 - +MT107528.1 3398 3420 scheme_12_LEFT pool2 + +MT107528.1 3803 3830 scheme_12_RIGHT pool2 - +MT107528.1 3957 3981 scheme_14_LEFT pool2 + +MT107528.1 4358 4384 scheme_14_RIGHT pool2 - +MT107528.1 4454 4483 scheme_16_LEFT pool2 + +MT107528.1 4862 4887 scheme_16_RIGHT pool2 - +MT107528.1 5114 5136 scheme_18_LEFT pool2 + +MT107528.1 5459 5482 scheme_18_RIGHT pool2 - +MT107528.1 5795 5819 scheme_20_LEFT pool2 + +MT107528.1 6204 6228 scheme_20_RIGHT pool2 - +MT107528.1 6299 6326 scheme_22_LEFT pool2 + +MT107528.1 6705 6727 scheme_22_RIGHT pool2 - +MT107528.1 6870 6894 scheme_24_LEFT pool2 + +MT107528.1 7259 7289 scheme_24_RIGHT pool2 - +MT107528.1 7367 7393 scheme_26_LEFT pool2 + +MT107528.1 7775 7797 scheme_26_RIGHT pool2 - +MT107528.1 7890 7918 scheme_28_LEFT pool2 + +MT107528.1 8284 8315 scheme_28_RIGHT pool2 - +MT107528.1 8468 8500 scheme_30_LEFT pool2 + +MT107528.1 8869 8891 scheme_30_RIGHT pool2 - +MT107528.1 9063 9087 scheme_32_LEFT pool2 + +MT107528.1 9476 9498 scheme_32_RIGHT pool2 - +MT107528.1 9737 9768 scheme_34_LEFT pool2 + 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--- /dev/null +++ b/tests/README.md @@ -0,0 +1,3 @@ +This tests in this directory are not run routinely. + +The workflow tests that are automatically performed upon each update on GitHub can be found at https://github.com/cbg-ethz/V-pipe/tree/master/.github/workflows.