From 213c5e00dadec26a842f3aada5e5cbaa6a71fa3d Mon Sep 17 00:00:00 2001
From: LaraFuhrmann <55209716+LaraFuhrmann@users.noreply.github.com>
Date: Wed, 11 Oct 2023 14:49:37 +0200
Subject: [PATCH] [performance_global] add second csv with 0.005 threshold for
 true postives

---
 .../workflow/scripts/performance_measures_global.py          | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/resources/auxiliary_workflows/benchmark/workflow/scripts/performance_measures_global.py b/resources/auxiliary_workflows/benchmark/workflow/scripts/performance_measures_global.py
index ab687239..f6360cb3 100644
--- a/resources/auxiliary_workflows/benchmark/workflow/scripts/performance_measures_global.py
+++ b/resources/auxiliary_workflows/benchmark/workflow/scripts/performance_measures_global.py
@@ -612,10 +612,13 @@ def main(
     benchmark_plots(df_bench, dname_out)
 
     # precision/recall
-    df_pr = compute_pr(df_pred, df_true)
+    df_pr = compute_pr(df_pred, df_true, thres=0.005)
+    df_pr.to_csv(csv_dir / "pr_results_thres0.005.csv")
+    df_pr = compute_pr(df_pred, df_true, thres=0.01)
     plot_pr(df_pr, df_stats, dname_out)
     df_pr.to_csv(csv_dir / "pr_results.csv")
 
+
     if quast:
         # quast stuff
         df_quast = run_metaquast(