From 09e10bdd827f6b086ed4fac4ecf60c2ba99a27a1 Mon Sep 17 00:00:00 2001 From: Kori Kuzma Date: Fri, 23 Aug 2024 08:58:31 -0400 Subject: [PATCH] update reqs --- requirements.txt | 121 +++++++++++++++++++---------------------------- 1 file changed, 49 insertions(+), 72 deletions(-) diff --git a/requirements.txt b/requirements.txt index 152f56e3..4fcd91eb 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,89 +1,66 @@ -aiofiles==23.1.0 -anyio==3.7.1 -appdirs==1.4.4 -appnope==0.1.3 -asttokens==2.2.1 -asyncpg==0.28.0 -attrs==23.1.0 -backcall==0.2.0 -beautifulsoup4==4.12.2 -biocommons.seqrepo==0.6.5 +agct==0.1.0.dev2 +aiofiles==24.1.0 +annotated-types==0.7.0 +anyio==4.4.0 +asttokens==2.4.1 +async-timeout==4.0.3 +asyncpg==0.29.0 +attrs==24.2.0 +biocommons.seqrepo==0.6.9 bioutils==0.5.8.post1 -boto3==1.28.11 -botocore==1.31.11 -bs4==0.0.1 +boto3==1.35.4 +botocore==1.35.4 canonicaljson==2.0.0 -certifi==2023.7.22 -charset-normalizer==3.2.0 -click==8.1.6 +certifi==2024.7.4 +charset-normalizer==3.3.2 +click==8.1.7 coloredlogs==15.0.1 -configparser==6.0.0 -cool-seq-tool==0.5.1 -cssselect==1.2.0 -Cython==3.0.0 +configparser==7.1.0 +cool_seq_tool==0.7.0 decorator==5.1.1 -executing==1.2.0 -fake-useragent==1.1.3 -fastapi==0.100.0 +executing==2.0.1 +fastapi==0.112.1 fusor==0.4.1 ga4gh.vrs==2.0.0a10 gene-normalizer==0.4.0 h11==0.14.0 hgvs==1.5.4 humanfriendly==10.0 -idna==3.4 -importlib-metadata==6.8.0 -inflection==0.5.1 -ipython==8.14.0 -jedi==0.18.2 -Jinja2==3.1.2 +idna==3.7 +importlib_metadata==8.4.0 +ipython==8.26.0 +jedi==0.19.1 +Jinja2==3.1.4 jmespath==1.0.1 -jsonschema==3.2.0 -lxml==4.9.3 -Markdown==3.4.4 -MarkupSafe==2.1.3 -matplotlib-inline==0.1.6 -numpy==1.25.1 -pandas==2.0.3 -parse==1.19.1 +MarkupSafe==2.1.5 +matplotlib-inline==0.1.7 Parsley==1.3 -parso==0.8.3 -pexpect==4.8.0 -pickleshare==0.7.5 -prompt-toolkit==3.0.39 -psycopg2==2.9.6 +parso==0.8.4 +pexpect==4.9.0 +polars==1.5.0 +prompt_toolkit==3.0.47 +psycopg2==2.9.9 ptyprocess==0.7.0 -pure-eval==0.2.2 +pure_eval==0.2.3 pydantic==2.4.2 -pyee==8.2.2 -Pygments==2.15.1 -pyliftover==0.4 -pyppeteer==1.0.2 -pyquery==2.0.0 -pyrsistent==0.19.3 -pysam==0.21.0 -python-dateutil==2.8.2 -python-jsonschema-objects==0.4.2 -pytz==2023.3 -PyYAML==6.0.1 -requests==2.31.0 -requests-html==0.10.0 -s3transfer==0.6.1 +pydantic_core==2.10.1 +Pygments==2.18.0 +pysam==0.22.1 +python-dateutil==2.9.0.post0 +requests==2.32.3 +s3transfer==0.10.2 six==1.16.0 -sniffio==1.3.0 -soupsieve==2.4.1 -sqlparse==0.4.4 -stack-data==0.6.2 -starlette==0.27.0 +sniffio==1.3.1 +sqlparse==0.5.1 +stack-data==0.6.3 +starlette==0.38.2 tabulate==0.9.0 -tqdm==4.65.0 -traitlets==5.9.0 -typing_extensions==4.7.1 -tzdata==2023.3 -urllib3==1.26.16 -uvicorn==0.23.1 -w3lib==2.1.1 -wcwidth==0.2.6 -websockets==10.4 +tqdm==4.66.5 +traitlets==5.14.3 +typing_extensions==4.12.2 +urllib3==1.26.19 +uvicorn==0.30.6 +wags_tails==0.1.4 +wcwidth==0.2.13 yoyo-migrations==8.2.0 -zipp==3.16.2 +zipp==3.20.0