From e03a34fe8af8aaeee027dada593b61f8a10c43ed Mon Sep 17 00:00:00 2001
From: Katie Stahl <kathryn.stahl@nationwidechildrens.org>
Date: Tue, 13 Aug 2024 16:37:53 -0400
Subject: [PATCH] fix: transcript lookup

---
 client/src/services/ResponseModels.ts | 7 +++++++
 server/src/curfu/routers/utilities.py | 2 +-
 server/src/curfu/schemas.py           | 6 ++++++
 3 files changed, 14 insertions(+), 1 deletion(-)

diff --git a/client/src/services/ResponseModels.ts b/client/src/services/ResponseModels.ts
index ff5f1979..e8087525 100644
--- a/client/src/services/ResponseModels.ts
+++ b/client/src/services/ResponseModels.ts
@@ -760,6 +760,13 @@ export interface GetDomainResponse {
   warnings?: string[] | null;
   domain: FunctionalDomain | null;
 }
+/**
+ * Response model for MANE transcript retrieval endpoint.
+ */
+export interface GetGeneTranscriptsResponse {
+  warnings?: string[] | null;
+  transcripts?: string[];
+}
 /**
  * Response model for MANE transcript retrieval endpoint.
  */
diff --git a/server/src/curfu/routers/utilities.py b/server/src/curfu/routers/utilities.py
index 3caa2daf..21940604 100644
--- a/server/src/curfu/routers/utilities.py
+++ b/server/src/curfu/routers/utilities.py
@@ -65,7 +65,7 @@ async def get_transcripts_for_gene(request: Request, gene: str) -> dict:
     :return: Dict containing transcripts if lookup succeeds, or warnings upon failure
     """
     normalized = request.app.state.fusor.gene_normalizer.normalize(gene)
-    symbol = normalized.gene_descriptor.label
+    symbol = normalized.gene.label
     transcripts = await request.app.state.fusor.cool_seq_tool.uta_db.get_transcripts(
         gene=symbol
     )
diff --git a/server/src/curfu/schemas.py b/server/src/curfu/schemas.py
index 007c6d9b..5307907f 100644
--- a/server/src/curfu/schemas.py
+++ b/server/src/curfu/schemas.py
@@ -250,6 +250,12 @@ class GetTranscriptsResponse(Response):
     transcripts: list[ManeGeneTranscript] | None
 
 
+class GetGeneTranscriptsResponse(Response):
+    """Response model for MANE transcript retrieval endpoint."""
+
+    transcripts: list[str] = None
+
+
 class ServiceInfoResponse(Response):
     """Response model for service_info endpoint."""