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Merge branch 'hotfix/2.0.8'
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sb43 committed Jan 16, 2019
2 parents e1dfd5a + f8a30dc commit 434d0d1
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4 changes: 3 additions & 1 deletion CHANGES.md
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# CHANGES
## 2.0.8
* added version tag in write_results def to avoids tests failing

## 2.0.7
* Signture input can be directory or archive file, modified to handle docstore json input
* Signture input can be directory or archive file, modified to handle dockstore json input
* Signature names now automatically constructed based on file names
## 2.0.6
* Added explicit file handler close to avoid empty files in the results archive
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4 changes: 1 addition & 3 deletions pyCRISPRcleanR/staticMethods.py
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from pyCRISPRcleanR.plots import PlotData as PLT
from . import segmentation

version = pkg_resources.require("pyCRISPRcleanR")[0].version

log = logging.getLogger(__name__)

MAGECK_CMD = "mageck test --count-table {} --control-id {} --treatment-id {} --output-prefix {} --norm-method {}"
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:return:
"""
global RESULTS_FILE
global version
version = pkg_resources.require("pyCRISPRcleanR")[0].version
file_ext = '.tar.bz2'
generated_files = []
for (dirpath, dirnames, filenames) in os.walk(outdir):
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2 changes: 1 addition & 1 deletion setup.py
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from setuptools import setup

config = {
'version': '2.0.7',
'version': '2.0.8',
'name': 'pyCRISPRcleanR',
'description': 'This is python implementation of CRISPRcleanR package for unsupervised identification and correction of gene independent cell responses to CRISPR-cas9 targeting',
'author': 'Shriram Bhosle',
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