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DESCRIPTION
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DESCRIPTION
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Package: SLICE
Type: Package
Title: Determining Cell Differentiation and Lineage based on Single Cell Entropy
Version: 0.99.0
Date: 2017-05-15
Authors@R: person("Minzhe", "Guo", email = "[email protected]", role = c("aut", "cre"))
Depends:
R (>= 3.2.0)
Imports:
Biobase,
BioNet,
cluster,
entropy,
ggplot2,
graph,
grid,
gridExtra,
igraph,
lmtest,
methods,
mgcv,
princurve,
reshape2,
splines
Maintainer: Minzhe Guo <[email protected]>
URL: https://github.com/minzheguo/SLICE
BugReports: https://github.com/minzheguo/SLICE/issues
Description: This is the R package of the SLICE algorithm,
which utilizes single-cell RNA-seq (scRNA-seq) data to quantitatively
measure cellular differentiation states based on single cell entropy
and predict cell differentiation lineages via the construction of entropy
directed cell trajectories.
License: GPL-3
LazyData: TRUE
RoxygenNote: 6.0.1