DESCRIPTION

Package: ggpicrust2
Type: Package
Title: Make 'PICRUSt2' Output Analysis and Visualization Easier
Version: 1.7.4
Authors@R: c(
    person("Chen", "Yang", email = "cafferychen7850@gmail.com", role = c("aut", "cre")),
    person("Liangliang", "Zhang", email = "lxz716@case.edu ", role = "aut"))
Description: Provides a convenient way to analyze and visualize 'PICRUSt2' output with pre-defined plots and functions. Allows for generating statistical plots about microbiome functional predictions and offers customization options. Features a one-click option for creating publication-level plots, saving time and effort in producing professional-grade figures. Streamlines the 'PICRUSt2' analysis and visualization process. For more details, see Yang et al. (2023) <doi:10.1093/bioinformatics/btad470>.
BugReports: https://github.com/cafferychen777/ggpicrust2/issues
URL: https://github.com/cafferychen777/ggpicrust2, https://cafferychen777.github.io/ggpicrust2/
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Imports: 
    ALDEx2,
    aplot,
    DESeq2,
    dplyr,
    edgeR,
    GGally,
    ggplot2,
    grid,
    ggh4x,
    lefser,
    limma,
    Maaslin2,
    metagenomeSeq,
    MicrobiomeStat,
    readr,
    SummarizedExperiment,
    tibble,
    tidyr,
    ggprism,
    patchwork,
    circlize
Depends: 
    R (>= 2.10)
Suggests: 
    Biobase,
    KEGGREST,
    ComplexHeatmap,
    ggplotify,
    BiocGenerics,
    magrittr,
    utils,
    knitr,
    rmarkdown,
    testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr