Merge branch 'master' of https://github.com/cBioPortal/cbioportal

docs/Build-from-Docker.md

@@ -25,7 +25,7 @@ docker network create cbio-net
 
 ##### B. Start a MySQL docker container:
 
-In the following command, replace `/PATH/TO/cbioportal-seed.sql.gz` by the local filename of the seed database file `cbioportal-seed.sql.gz` on the host machine (you can [download the seed DB here](Downloads#seed-database)). This will automatically import it before starting the MySQL server if the database does not yet exist, which may take a while.
+In the following command, replace `/PATH/TO/cbioportal-seed.sql.gz` by the local filename of the seed database file `cbioportal-seed.sql.gz` on the host machine (you can [download the seed DB here](Downloads.md#seed-database)). This will automatically import it before starting the MySQL server if the database does not yet exist, which may take a while.
 
 ```bash
 docker run -d --name "cbioDB" \

docs/File-Formats.md

@@ -667,7 +667,7 @@ The fusion metadata file should contain the following fields:
 1. **cancer_study_identifier**: same value as specified in [study meta file](#cancer-study)
 2. **genetic_alteration_type**: FUSION
 3. **datatype**: FUSION
-4. **stable_id**: fusion
+4. **stable_id**: mutations
 5. **show_profile_in_analysis_tab**: true.
 6. **profile_name**: A name for the fusion data, e.g., "Fusions.".
 7. **profile_description**: A description of the fusion data.
@@ -679,7 +679,7 @@ An example metadata file would be:
 cancer_study_identifier: brca_tcga_pub
 genetic_alteration_type: FUSION
 datatype: FUSION
-stable_id: fusion
+stable_id: mutations
 profile_description: Fusions.
 show_profile_in_analysis_tab: true
 profile_name: Fusions
@@ -975,4 +975,4 @@ rank<TAB>gene<TAB>N<TAB>n<TAB>p<TAB>q
 1<TAB>RUNX1<TAB>1051659<TAB>29<TAB>1.11E-16<TAB>1.88E-12
 2<TAB>PIK3CA<TAB>3200341<TAB>351<TAB><1.00e-15<TAB><2.36e-12
 ...
-```
+```