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Quartz window error #393

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mcaputo3 opened this issue Oct 25, 2024 · 1 comment
Open

Quartz window error #393

mcaputo3 opened this issue Oct 25, 2024 · 1 comment

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@mcaputo3
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When I run MixSIAR on my mac, I often get the error of

Error in UseMethod("depth") :
no applicable method for 'depth' applied to an object of class "NULL"
In addition: There were 15 warnings (use warnings() to see them)

This happens especially if i have lots of Quartz windows open. Then the MixSIAR stats summary and diagnostics do not output. If i keep pressing RUN on the line of code "output_JAGS(jags.1, mix, source)" and keep closing quartz windows, I eventually get it to run properly including all the outputs MixSIAR is supposed to have. I've tried suppressing the plotting using the out_options code, but i never seem to be able to get that to work (the plots still run even if i have FALSE).

It's extremely annoying when you are running a lot of models to have to keep running the output dialogue until you get it to, for some reason, work all of a sudden. Can you help me with what is happening here? I know this problem has come up for MAC before but I don't see a good solution...

Thanks so much!

@camillemosley
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I'm having the same issues on my mac when I run the output_JAGS function in MixSIAR.

Error in UseMethod("depth") :
no applicable method for 'depth' applied to an object of class "NULL"
In addition: Warning messages:
1: In par(usr) : argument 1 does not name a graphical parameter
2: In par(usr) : argument 1 does not name a graphical parameter
3: In par(usr) : argument 1 does not name a graphical parameter

Any feedback on possible troubleshooting would be very helpful. I'm trying to generate summary plots and save output but I'm having difficulties with the current version of the package which I downloaded from GitHub. Thank you.

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