From e7b9bfd73422a8ebae785376ebfb474ebfc85be0 Mon Sep 17 00:00:00 2001 From: Dorota Jarecka Date: Tue, 3 Dec 2024 19:44:10 -0500 Subject: [PATCH] removing commented parts from bican_biolink --- linkml-schema/bican_biolink.yaml | 268 ------------------------------- 1 file changed, 268 deletions(-) diff --git a/linkml-schema/bican_biolink.yaml b/linkml-schema/bican_biolink.yaml index bd90e7ff2..ce1bddad2 100644 --- a/linkml-schema/bican_biolink.yaml +++ b/linkml-schema/bican_biolink.yaml @@ -532,274 +532,6 @@ types: typeof: string base: str uri: xsd:string - # string: - # name: string - # definition_uri: https://w3id.org/linkml/String - # description: A character string - # notes: - # - In RDF serializations, a slot with range of string is treated as a literal or - # type xsd:string. If you are authoring schemas in LinkML YAML, the type is - # referenced with the lower case "string". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # exact_mappings: - # - schema:Text - # base: str - # uri: xsd:string - # integer: - # name: integer - # definition_uri: https://w3id.org/linkml/Integer - # description: An integer - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "integer". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # exact_mappings: - # - schema:Integer - # base: int - # uri: xsd:integer - # boolean: - # name: boolean - # definition_uri: https://w3id.org/linkml/Boolean - # description: A binary (true or false) value - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "boolean". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # exact_mappings: - # - schema:Boolean - # base: Bool - # uri: xsd:boolean - # repr: bool - # float: - # name: float - # definition_uri: https://w3id.org/linkml/Float - # description: A real number that conforms to the xsd:float specification - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "float". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # exact_mappings: - # - schema:Float - # base: float - # uri: xsd:float - # double: - # name: double - # definition_uri: https://w3id.org/linkml/Double - # description: A real number that conforms to the xsd:double specification - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "double". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # close_mappings: - # - schema:Float - # base: float - # uri: xsd:double - # decimal: - # name: decimal - # definition_uri: https://w3id.org/linkml/Decimal - # description: A real number with arbitrary precision that conforms to the xsd:decimal - # specification - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "decimal". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # broad_mappings: - # - schema:Number - # base: Decimal - # uri: xsd:decimal - # time: - # name: time - # definition_uri: https://w3id.org/linkml/Time - # description: A time object represents a (local) time of day, independent of any - # particular day - # notes: - # - URI is dateTime because OWL reasoners do not work with straight date or time - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "time". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # exact_mappings: - # - schema:Time - # base: XSDTime - # uri: xsd:time - # repr: str - # date: - # name: date - # definition_uri: https://w3id.org/linkml/Date - # description: a date (year, month and day) in an idealized calendar - # notes: - # - URI is dateTime because OWL reasoners don't work with straight date or time - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "date". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # exact_mappings: - # - schema:Date - # base: XSDDate - # uri: xsd:date - # repr: str - # datetime: - # name: datetime - # definition_uri: https://w3id.org/linkml/Datetime - # description: The combination of a date and time - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "datetime". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # exact_mappings: - # - schema:DateTime - # base: XSDDateTime - # uri: xsd:dateTime - # repr: str - # date_or_datetime: - # name: date_or_datetime - # definition_uri: https://w3id.org/linkml/DateOrDatetime - # description: Either a date or a datetime - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "date_or_datetime". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: str - # uri: linkml:DateOrDatetime - # repr: str - # uriorcurie: - # name: uriorcurie - # definition_uri: https://w3id.org/linkml/Uriorcurie - # description: a URI or a CURIE - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "uriorcurie". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: URIorCURIE - # uri: xsd:anyURI - # repr: str - # curie: - # name: curie - # definition_uri: https://w3id.org/linkml/Curie - # conforms_to: https://www.w3.org/TR/curie/ - # description: a compact URI - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "curie". - # comments: - # - in RDF serializations this MUST be expanded to a URI - # - in non-RDF serializations MAY be serialized as the compact representation - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: Curie - # uri: xsd:string - # repr: str - # uri: - # name: uri - # definition_uri: https://w3id.org/linkml/Uri - # conforms_to: https://www.ietf.org/rfc/rfc3987.txt - # description: a complete URI - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "uri". - # comments: - # - in RDF serializations a slot with range of uri is treated as a literal or type - # xsd:anyURI unless it is an identifier or a reference to an identifier, in which - # case it is translated directly to a node - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # close_mappings: - # - schema:URL - # base: URI - # uri: xsd:anyURI - # repr: str - # ncname: - # name: ncname - # definition_uri: https://w3id.org/linkml/Ncname - # description: Prefix part of CURIE - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "ncname". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: NCName - # uri: xsd:string - # repr: str - # objectidentifier: - # name: objectidentifier - # definition_uri: https://w3id.org/linkml/Objectidentifier - # description: A URI or CURIE that represents an object in the model. - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "objectidentifier". - # comments: - # - Used for inheritance and type checking - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: ElementIdentifier - # uri: shex:iri - # repr: str - # nodeidentifier: - # name: nodeidentifier - # definition_uri: https://w3id.org/linkml/Nodeidentifier - # description: A URI, CURIE or BNODE that represents a node in a model. - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "nodeidentifier". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: NodeIdentifier - # uri: shex:nonLiteral - # repr: str - # jsonpointer: - # name: jsonpointer - # definition_uri: https://w3id.org/linkml/Jsonpointer - # conforms_to: https://datatracker.ietf.org/doc/html/rfc6901 - # description: A string encoding a JSON Pointer. The value of the string MUST conform - # to JSON Point syntax and SHOULD dereference to a valid object within the current - # instance document when encoded in tree form. - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "jsonpointer". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: str - # uri: xsd:string - # repr: str - # jsonpath: - # name: jsonpath - # definition_uri: https://w3id.org/linkml/Jsonpath - # conforms_to: https://www.ietf.org/archive/id/draft-goessner-dispatch-jsonpath-00.html - # description: A string encoding a JSON Path. The value of the string MUST conform - # to JSON Point syntax and SHOULD dereference to zero or more valid objects within - # the current instance document when encoded in tree form. - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "jsonpath". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: str - # uri: xsd:string - # repr: str - # sparqlpath: - # name: sparqlpath - # definition_uri: https://w3id.org/linkml/Sparqlpath - # conforms_to: https://www.w3.org/TR/sparql11-query/#propertypaths - # description: A string encoding a SPARQL Property Path. The value of the string - # MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects - # within the current instance document when encoded as RDF. - # notes: - # - If you are authoring schemas in LinkML YAML, the type is referenced with the - # lower case "sparqlpath". - # from_schema: https://w3id.org/linkml/types - # imported_from: linkml:types - # base: str - # uri: xsd:string - # repr: str slots: has attribute: name: has attribute