generate_yaml_model.yaml

name: generating yaml file

on:
  push:
    paths:
      - 'linkml-schema/source_library_generation/**'
  pull_request:
    paths:
      - 'linkml-schema/source_library_generation/**'

permissions:
  contents: write

jobs:
  generate:
    runs-on: ubuntu-latest
    steps:
      - name: Checkout this repository
        uses: actions/checkout@v3

      - name: Set up Python
        uses: actions/setup-python@v4
        with:
          python-version: 3.9

      - name: Install the required python packages
        run: |
          python -m pip install .[test]
          pip install git+https://github.com/brain-bican/bkbit.git
          pip install git+https://github.com/linkml/schemasheets.git@649af7e1

      - name: Other installations
        run: |
          sudo apt-get update
          sudo apt-get install -y build-essential git wget curl

      - name: Generate yaml model
        run: |
          cd linkml-schema
          bkbit schema2model -o library_generation.yaml --gsheet --gsheet-download-dir source_library_generation/gsheet_output  source_library_generation/gsheet.yaml  --no-inlined
          cd ..

      - name: Adding other model representations to git
        # this might fail when running in PR mode because of the git push
        # but the files should be added since it's also run on push
        continue-on-error: true
        run: |
          git config --local user.email "action@github.com"
          git config --local user.name "GitHub Action"
          if ! git ls-files --error-unmatch linkml-schema/library_generation.yaml; then
            git add linkml-schema/library_generation.yaml
            git add linkml-schema/source_library_generation/gsheet_output
            git commit -m "adding a new linkml model"
          elif ! git diff --quiet; then
            git add linkml-schema/library_generation.yaml
            git add linkml-schema/source_library_generation/gsheet_output
            git commit -m "generate new version of the linkml model"
            echo "Changes detected, after committing"
            git push
          else
            echo "No changes to commit"
          fi