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Describe the bug
The description for --i-busco-db in evaluate-busco says:
"BUSCO database. If provided BUSCO will run in
offline mode. If not provided a BUSCO database will
be downloaded to a temporary location and then
deleted."
But this is not true, if the db is not provided there is this error: There was a problem with the command: (1/1) Missing option '--i-busco-db'.
In the code it also does not look like this functionality was added, so I think the description is just wrong.
To Reproduce
Steps to reproduce the behavior: qiime moshpit evaluate-busco --i-bins mags.qza --output-dir out
Please complete the following information:
OS: macOS
QIIME 2 version: 2024.10.0.dev0+28.g10bb850
The text was updated successfully, but these errors were encountered:
VinzentRisch
changed the title
BUG: Wronf description for --i-busco-db in evaluate-busco
BUG: Wronf description for --i-busco-db in evaluate-buscoOct 24, 2024
VinzentRisch
changed the title
BUG: Wronf description for --i-busco-db in evaluate-busco
BUG: Wrong description for --i-busco-db in evaluate-buscoOct 24, 2024
Hey @VinzentRisch, just to clarify: you mean that functionality of downloading the DB if not provided was not added?
misialq
changed the title
BUG: Wrong description for --i-busco-db in evaluate-busco
BUG: wrong description for --i-busco-db in evaluate-buscoNov 1, 2024
Describe the bug
The description for --i-busco-db in
evaluate-busco
says:"BUSCO database. If provided BUSCO will run in
offline mode. If not provided a BUSCO database will
be downloaded to a temporary location and then
deleted."
But this is not true, if the db is not provided there is this error:
There was a problem with the command:
(1/1) Missing option '--i-busco-db'.
In the code it also does not look like this functionality was added, so I think the description is just wrong.
To Reproduce
Steps to reproduce the behavior:
qiime moshpit evaluate-busco --i-bins mags.qza --output-dir out
Please complete the following information:
The text was updated successfully, but these errors were encountered: