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ENH: action to join ortholog annotations artifacts (FeatureData[NOG]) #138

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Sann5 opened this issue Feb 21, 2024 · 0 comments · Fixed by #139
Closed

ENH: action to join ortholog annotations artifacts (FeatureData[NOG]) #138

Sann5 opened this issue Feb 21, 2024 · 0 comments · Fixed by #139
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enhancement New feature or request

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@Sann5
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Sann5 commented Feb 21, 2024

  • Previous work in the repo focused on parallelizing the eggnog-diamond-search and eggnog-annotation actions (ENH: Expose cpu param in eggnog-annotate action. #135 ENH: enable parsl parallelization of eggnog-diamond-search #126).
  • The chosen strategy implies splitting the input into smaller inputs and running many actions simultaneously on the smaller inputs which in turn have smaller outputs.
  • These smaller outputs need to be joined after the eggnog-annotate action which outputs FeatureData[NOG] artifacts, in order to carry out a final analysis for example.
  • Therefore there is a need for an action that joins these FeatureData[NOG] artifacts.
@Sann5 Sann5 added the enhancement New feature or request label Feb 21, 2024
@Sann5 Sann5 self-assigned this Feb 21, 2024
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