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Describe alternatives you've considered
We could calculate this on the fly but we may need this information in a couple of different places and we have a semantic type to store it so this is probably the best way to go.
Additional context
This will be needed e.g. in MAG abundance calculation (#33).
The text was updated successfully, but these errors were encountered:
Is your feature request related to a problem? Please describe.
No.
Describe the solution you'd like
We need an action which will get the lengths of all the MAGs stored in
FeatureData[MAG]
:get-feature-lengths
FeatureData[MAG]
; once we have contigs with unique IDs we could also allow them hereFeatureData[SequenceCharacteristics % Properties(length)]
as defined in ENH: Added new typeFeatureData[SequenceCharacteristics]
with semantic validator for property 'length'. qiime2/q2-types#326Describe alternatives you've considered
We could calculate this on the fly but we may need this information in a couple of different places and we have a semantic type to store it so this is probably the best way to go.
Additional context
This will be needed e.g. in MAG abundance calculation (#33).
The text was updated successfully, but these errors were encountered: