From 40ee8d5d096e6cdd81f773f1959d977e260f0cea Mon Sep 17 00:00:00 2001 From: Liz Gehret Date: Thu, 22 Feb 2024 11:10:10 -0700 Subject: [PATCH 1/2] DOC: fixes citation formatting reqs for sphinx docs builds --- rescript/citations.bib | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/rescript/citations.bib b/rescript/citations.bib index 7061da8..42d62eb 100644 --- a/rescript/citations.bib +++ b/rescript/citations.bib @@ -1,7 +1,8 @@ @article {Robeson2021rescript, author = {Robeson, Michael S and O{\textquoteright}Rourke, Devon R and Kaehler, Benjamin D and Ziemski, Michal and Dillon, Matthew R and Foster, Jeffrey T and Bokulich, Nicholas A}, title = {RESCRIPt: Reproducible sequence taxonomy reference database management}, - year = {2021}, + journal = {PLoS Computational Biology}, + year = {2021}, doi = {10.1371/journal.pcbi.1009581}, publisher = {PLoS Computational Biology}, URL = {http://dx.doi.org/10.1371/journal.pcbi.1009581} @@ -66,6 +67,7 @@ @article{Quast2013 @article{ncbi2018database, title={Database resources of the national center for biotechnology information}, + author={NCBI Resource Coordinators}, journal={Nucleic acids research}, volume={46}, number={D1}, From 4cbb5fabad9e91ab1a138c44936af7df3b12230c Mon Sep 17 00:00:00 2001 From: Evan Bolyen Date: Mon, 26 Feb 2024 10:30:13 -0700 Subject: [PATCH 2/2] Update citations.bib --- rescript/citations.bib | 14 ++++++++------ 1 file changed, 8 insertions(+), 6 deletions(-) diff --git a/rescript/citations.bib b/rescript/citations.bib index 42d62eb..442c8c5 100644 --- a/rescript/citations.bib +++ b/rescript/citations.bib @@ -1,11 +1,11 @@ @article {Robeson2021rescript, - author = {Robeson, Michael S and O{\textquoteright}Rourke, Devon R and Kaehler, Benjamin D and Ziemski, Michal and Dillon, Matthew R and Foster, Jeffrey T and Bokulich, Nicholas A}, - title = {RESCRIPt: Reproducible sequence taxonomy reference database management}, - journal = {PLoS Computational Biology}, + author = {Robeson, Michael S and O{\textquoteright}Rourke, Devon R and Kaehler, Benjamin D and Ziemski, Michal and Dillon, Matthew R and Foster, Jeffrey T and Bokulich, Nicholas A}, + title = {RESCRIPt: Reproducible sequence taxonomy reference database management}, + journal = {PLoS Computational Biology}, year = {2021}, - doi = {10.1371/journal.pcbi.1009581}, - publisher = {PLoS Computational Biology}, - URL = {http://dx.doi.org/10.1371/journal.pcbi.1009581} + doi = {10.1371/journal.pcbi.1009581}, + publisher = {Public Library of Science}, + url = {http://dx.doi.org/10.1371/journal.pcbi.1009581} } @article{rognes2016vsearch, @@ -74,6 +74,8 @@ @article{ncbi2018database pages={D8--D13}, year={2018}, publisher={Oxford University Press} + doi = {10.1093/nar/gkx1095}, + url = {https://doi.org/10.1093/nar/gkx1095}, } @article{benson2012genbank,