Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

SAM: supplementary alignments / tags #14

Open
jblachly opened this issue Jul 26, 2021 · 0 comments
Open

SAM: supplementary alignments / tags #14

jblachly opened this issue Jul 26, 2021 · 0 comments
Assignees
@charlesgregory
Labels
enhancement New feature or request

Comments

@jblachly
Copy link
Member

Contig names/references can appear in tags in SAM file for supplementary alignments.

For BAM not sure if encoded as integer tid, or whether would be string?
@jblachly jblachly added the enhancement New feature or request label Jul 26, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@charlesgregory charlesgregory

Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@jblachly @charlesgregory