Merge pull request #115 from biothings/fix-846-bte

Update tests and GitHub Workflow
biothings · Aug 19, 2024 · 8c1f094 · 8c1f094
2 parents e375b08 + d30f70f
commit 8c1f094
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Showing 2 changed files with 13 additions and 3 deletions.
diff --git a/.github/workflows/test_ws_codecov.yml b/.github/workflows/test_ws_codecov.yml
@@ -13,11 +13,21 @@ jobs:
       id: branch-name
       uses: tj-actions/[email protected]
 
-    - uses: actions/checkout@v3
+    - name: Checkout to specific branch
+      uses: actions/checkout@v3
+      id: specific-checkout
+      continue-on-error: true
       with:
         repository: biothings/biothings_explorer
         ref: ${{ steps.branch-name.outputs.current_branch }}
 
+    - name: Checkout to main if above failed
+      if: steps.specific-checkout.outcome == 'failure'
+      uses: actions/checkout@v3
+      with:
+        repository: biothings/biothings_explorer
+        ref: main
+
     - name: Use Node.js 18.x
       uses: actions/setup-node@v3
       with:

diff --git a/__tests__/integration/sri_resolver.test.ts b/__tests__/integration/sri_resolver.test.ts
@@ -86,12 +86,12 @@ describe("Test SRI Resolver", () => {
 
   test("Test handling semantic type conflicts", async () => {
     let input = {
-      "SmallMolecule": ["PUBCHEM.COMPOUND:23680530"]
+      "MolecularMixture": ["PUBCHEM.COMPOUND:23680530"]
     };
     const res = await resolveSRI(input);
 
     expect(res["PUBCHEM.COMPOUND:23680530"].primaryTypes.length).toBe(2);
-    expect(res["PUBCHEM.COMPOUND:23680530"].primaryTypes).toEqual(["MolecularMixture", "SmallMolecule"])
+    expect(res["PUBCHEM.COMPOUND:23680530"].primaryTypes).toEqual(["SmallMolecule", "MolecularMixture"])
   });
 
   test("Test large batch of inputs should be correctly resolved and should not give an error", async () => {