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Biostar Handbook Install Error #337

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Kcichos opened this issue Sep 4, 2024 · 2 comments
Open

Biostar Handbook Install Error #337

Kcichos opened this issue Sep 4, 2024 · 2 comments

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@Kcichos
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Kcichos commented Sep 4, 2024

Installing on linux (Ubuntu), followed all initial instructions directly from setup instructions. single computer workstation. Returned the following after running the command:

curl http://data.biostarhandbook.com/install.sh | bash 
# 1. Installing micromamba
#

bzip2: Compressed file ends unexpectedly;
	perhaps it is corrupted?  *Possible* reason follows.
bzip2: Inappropriate ioctl for device
	Input file = (stdin), output file = (stdout)

It is possible that the compressed file(s) have become corrupted.
You can use the -tvv option to test integrity of such files.

You can use the `bzip2recover' program to attempt to recover
data from undamaged sections of corrupted files.

tar: Child returned status 2
tar: Error is not recoverable: exiting now

Note: bzip2 is installed and upgraded. I attempted to re-install after uninstalling anything that got installed initially and had the same error

Any help on how to proceed would be appreciated

@ialbert
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ialbert commented Sep 5, 2024

the command that the installer attempts to run is

curl -Lks https://micro.mamba.pm/api/micromamba/linux-64/latest | tar -xj bin/micromamba

Does the above command run correctly on your system?

The error will present itself if the download is not completed for some reason. Or if curl is not following the redirects.

@Kcichos
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Kcichos commented Sep 5, 2024

Same error. Based on your redirect comment, it appears to be a firewall issue. Working with IT but will assume addressing the firewall will resolve issue. Thanks!

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