diff --git a/poetry.lock b/poetry.lock
index 22fb6b3c..b85d543b 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -37,21 +37,21 @@ python-dateutil = ">=2.7.0"
 
 [[package]]
 name = "attrs"
-version = "22.2.0"
+version = "23.1.0"
 description = "Classes Without Boilerplate"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
-    {file = "attrs-22.2.0-py3-none-any.whl", hash = "sha256:29e95c7f6778868dbd49170f98f8818f78f3dc5e0e37c0b1f474e3561b240836"},
-    {file = "attrs-22.2.0.tar.gz", hash = "sha256:c9227bfc2f01993c03f68db37d1d15c9690188323c067c641f1a35ca58185f99"},
+    {file = "attrs-23.1.0-py3-none-any.whl", hash = "sha256:1f28b4522cdc2fb4256ac1a020c78acf9cba2c6b461ccd2c126f3aa8e8335d04"},
+    {file = "attrs-23.1.0.tar.gz", hash = "sha256:6279836d581513a26f1bf235f9acd333bc9115683f14f7e8fae46c98fc50e015"},
 ]
 
 [package.extras]
-cov = ["attrs[tests]", "coverage-enable-subprocess", "coverage[toml] (>=5.3)"]
-dev = ["attrs[docs,tests]"]
-docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope.interface"]
-tests = ["attrs[tests-no-zope]", "zope.interface"]
-tests-no-zope = ["cloudpickle", "cloudpickle", "hypothesis", "hypothesis", "mypy (>=0.971,<0.990)", "mypy (>=0.971,<0.990)", "pympler", "pympler", "pytest (>=4.3.0)", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-mypy-plugins", "pytest-xdist[psutil]", "pytest-xdist[psutil]"]
+cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
+dev = ["attrs[docs,tests]", "pre-commit"]
+docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
+tests = ["attrs[tests-no-zope]", "zope-interface"]
+tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
 
 [[package]]
 name = "babel"
@@ -82,24 +82,24 @@ stringcase = ">=1.2.0,<2.0.0"
 
 [[package]]
 name = "cachetools"
-version = "5.3.0"
+version = "5.3.1"
 description = "Extensible memoizing collections and decorators"
 optional = false
-python-versions = "~=3.7"
+python-versions = ">=3.7"
 files = [
-    {file = "cachetools-5.3.0-py3-none-any.whl", hash = "sha256:429e1a1e845c008ea6c85aa35d4b98b65d6a9763eeef3e37e92728a12d1de9d4"},
-    {file = "cachetools-5.3.0.tar.gz", hash = "sha256:13dfddc7b8df938c21a940dfa6557ce6e94a2f1cdfa58eb90c805721d58f2c14"},
+    {file = "cachetools-5.3.1-py3-none-any.whl", hash = "sha256:95ef631eeaea14ba2e36f06437f36463aac3a096799e876ee55e5cdccb102590"},
+    {file = "cachetools-5.3.1.tar.gz", hash = "sha256:dce83f2d9b4e1f732a8cd44af8e8fab2dbe46201467fc98b3ef8f269092bf62b"},
 ]
 
 [[package]]
 name = "certifi"
-version = "2022.12.7"
+version = "2023.5.7"
 description = "Python package for providing Mozilla's CA Bundle."
 optional = false
 python-versions = ">=3.6"
 files = [
-    {file = "certifi-2022.12.7-py3-none-any.whl", hash = "sha256:4ad3232f5e926d6718ec31cfc1fcadfde020920e278684144551c91769c7bc18"},
-    {file = "certifi-2022.12.7.tar.gz", hash = "sha256:35824b4c3a97115964b408844d64aa14db1cc518f6562e8d7261699d1350a9e3"},
+    {file = "certifi-2023.5.7-py3-none-any.whl", hash = "sha256:c6c2e98f5c7869efca1f8916fed228dd91539f9f1b444c314c06eef02980c716"},
+    {file = "certifi-2023.5.7.tar.gz", hash = "sha256:0f0d56dc5a6ad56fd4ba36484d6cc34451e1c6548c61daad8c320169f91eddc7"},
 ]
 
 [[package]]
@@ -128,97 +128,97 @@ files = [
 
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 name = "charset-normalizer"
-version = "3.1.0"
+version = "3.2.0"
 description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
 optional = false
 python-versions = ">=3.7.0"
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 ]
 
 [[package]]
 name = "click"
-version = "8.1.3"
+version = "8.1.5"
 description = "Composable command line interface toolkit"
 optional = false
 python-versions = ">=3.7"
 files = [
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-    {file = "click-8.1.3.tar.gz", hash = "sha256:7682dc8afb30297001674575ea00d1814d808d6a36af415a82bd481d37ba7b8e"},
+    {file = "click-8.1.5-py3-none-any.whl", hash = "sha256:e576aa487d679441d7d30abb87e1b43d24fc53bffb8758443b1a9e1cee504548"},
+    {file = "click-8.1.5.tar.gz", hash = "sha256:4be4b1af8d665c6d942909916d31a213a106800c47d0eeba73d34da3cbc11367"},
 ]
 
 [package.dependencies]
@@ -251,24 +251,25 @@ test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"]
 
 [[package]]
 name = "curies"
-version = "0.4.5"
+version = "0.5.6"
 description = "Idiomatic conversion between URIs and compact URIs (CURIEs)."
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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+    {file = "curies-0.5.6-py3-none-any.whl", hash = "sha256:27eee34218bf645fdfb5c457bacfba0274146277bac600d9b9a83d2e5e01abcd"},
+    {file = "curies-0.5.6.tar.gz", hash = "sha256:fd9e72ea9b167911057726bd537c9956ed96d88ce71aecf59f9a47c6ca484ffe"},
 ]
 
 [package.dependencies]
+pydantic = "<2.0"
 pytrie = "*"
 requests = "*"
 
 [package.extras]
 bioregistry = ["bioregistry (>=0.5.136)"]
-docs = ["sphinx", "sphinx-autodoc-typehints", "sphinx-automodapi", "sphinx-rtd-theme"]
-fastapi = ["fastapi", "httpx"]
-flask = ["flask"]
+docs = ["sphinx (<7.0)", "sphinx-autodoc-typehints", "sphinx-automodapi", "sphinx-rtd-theme"]
+fastapi = ["defusedxml", "fastapi", "httpx", "python-multipart", "uvicorn"]
+flask = ["defusedxml", "flask"]
 pandas = ["pandas"]
 rdflib = ["rdflib"]
 tests = ["coverage", "pytest"]
@@ -286,20 +287,20 @@ files = [
 
 [[package]]
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-version = "1.2.13"
+version = "1.2.14"
 description = "Python @deprecated decorator to deprecate old python classes, functions or methods."
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
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 [package.dependencies]
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+dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "sphinx (<2)", "tox"]
 
 [[package]]
 name = "deprecation"
@@ -328,13 +329,13 @@ files = [
 
 [[package]]
 name = "docker"
-version = "6.0.1"
+version = "6.1.3"
 description = "A Python library for the Docker Engine API."
 optional = false
 python-versions = ">=3.7"
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 ]
 
 [package.dependencies]
@@ -371,13 +372,13 @@ files = [
 
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-version = "1.1.1"
+version = "1.1.2"
 description = "Backport of PEP 654 (exception groups)"
 optional = false
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 [package.extras]
@@ -385,18 +386,18 @@ test = ["pytest (>=6)"]
 
 [[package]]
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+version = "3.12.2"
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 [[package]]
 name = "fqdn"
@@ -427,76 +428,76 @@ test = ["coverage", "mock (>=4)", "pytest (>=7)", "pytest-cov", "pytest-mock (>=
 
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 [package.extras]
 docs = ["Sphinx", "docutils (<0.18)"]
-test = ["objgraph", "psutil"]
+test = ["faulthandler", "objgraph", "psutil"]
 
 [[package]]
 name = "hbreader"
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+    {file = "ijson-3.2.2.tar.gz", hash = "sha256:b9883c8716001d7a5c8185905208e40a77eef9b2a73dbce4d189ceb092aa93bd"},
 ]
 
 [[package]]
@@ -620,22 +621,22 @@ files = [
 
 [[package]]
 name = "importlib-metadata"
-version = "4.13.0"
+version = "6.8.0"
 description = "Read metadata from Python packages"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "importlib_metadata-4.13.0-py3-none-any.whl", hash = "sha256:8a8a81bcf996e74fee46f0d16bd3eaa382a7eb20fd82445c3ad11f4090334116"},
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+    {file = "importlib_metadata-6.8.0-py3-none-any.whl", hash = "sha256:3ebb78df84a805d7698245025b975d9d67053cd94c79245ba4b3eb694abe68bb"},
+    {file = "importlib_metadata-6.8.0.tar.gz", hash = "sha256:dbace7892d8c0c4ac1ad096662232f831d4e64f4c4545bd53016a3e9d4654743"},
 ]
 
 [package.dependencies]
 zipp = ">=0.5"
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)"]
+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
 perf = ["ipython"]
-testing = ["flake8 (<5)", "flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)"]
+testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"]
 
 [[package]]
 name = "inflection"
@@ -760,13 +761,13 @@ attrs = ">=19.2.0"
 
 [[package]]
 name = "jsonpatch"
-version = "1.32"
+version = "1.33"
 description = "Apply JSON-Patches (RFC 6902)"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
 files = [
-    {file = "jsonpatch-1.32-py2.py3-none-any.whl", hash = "sha256:26ac385719ac9f54df8a2f0827bb8253aa3ea8ab7b3368457bcdb8c14595a397"},
-    {file = "jsonpatch-1.32.tar.gz", hash = "sha256:b6ddfe6c3db30d81a96aaeceb6baf916094ffa23d7dd5fa2c13e13f8b6e600c2"},
+    {file = "jsonpatch-1.33-py2.py3-none-any.whl", hash = "sha256:0ae28c0cd062bbd8b8ecc26d7d164fbbea9652a1a3693f3b956c1eae5145dade"},
+    {file = "jsonpatch-1.33.tar.gz", hash = "sha256:9fcd4009c41e6d12348b4a0ff2563ba56a2923a7dfee731d004e212e1ee5030c"},
 ]
 
 [package.dependencies]
@@ -791,35 +792,37 @@ six = "*"
 
 [[package]]
 name = "jsonpointer"
-version = "2.3"
+version = "2.4"
 description = "Identify specific nodes in a JSON document (RFC 6901)"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
 files = [
-    {file = "jsonpointer-2.3-py2.py3-none-any.whl", hash = "sha256:51801e558539b4e9cd268638c078c6c5746c9ac96bc38152d443400e4f3793e9"},
-    {file = "jsonpointer-2.3.tar.gz", hash = "sha256:97cba51526c829282218feb99dab1b1e6bdf8efd1c43dc9d57be093c0d69c99a"},
+    {file = "jsonpointer-2.4-py2.py3-none-any.whl", hash = "sha256:15d51bba20eea3165644553647711d150376234112651b4f1811022aecad7d7a"},
+    {file = "jsonpointer-2.4.tar.gz", hash = "sha256:585cee82b70211fa9e6043b7bb89db6e1aa49524340dde8ad6b63206ea689d88"},
 ]
 
 [[package]]
 name = "jsonschema"
-version = "4.17.3"
+version = "4.18.3"
 description = "An implementation of JSON Schema validation for Python"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "jsonschema-4.17.3-py3-none-any.whl", hash = "sha256:a870ad254da1a8ca84b6a2905cac29d265f805acc57af304784962a2aa6508f6"},
-    {file = "jsonschema-4.17.3.tar.gz", hash = "sha256:0f864437ab8b6076ba6707453ef8f98a6a0d512a80e93f8abdb676f737ecb60d"},
+    {file = "jsonschema-4.18.3-py3-none-any.whl", hash = "sha256:aab78b34c2de001c6b692232f08c21a97b436fe18e0b817bf0511046924fceef"},
+    {file = "jsonschema-4.18.3.tar.gz", hash = "sha256:64b7104d72efe856bea49ca4af37a14a9eba31b40bb7238179f3803130fd34d9"},
 ]
 
 [package.dependencies]
-attrs = ">=17.4.0"
+attrs = ">=22.2.0"
 fqdn = {version = "*", optional = true, markers = "extra == \"format\""}
 idna = {version = "*", optional = true, markers = "extra == \"format\""}
 isoduration = {version = "*", optional = true, markers = "extra == \"format\""}
 jsonpointer = {version = ">1.13", optional = true, markers = "extra == \"format\""}
-pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2"
+jsonschema-specifications = ">=2023.03.6"
+referencing = ">=0.28.4"
 rfc3339-validator = {version = "*", optional = true, markers = "extra == \"format\""}
 rfc3987 = {version = "*", optional = true, markers = "extra == \"format\""}
+rpds-py = ">=0.7.1"
 uri-template = {version = "*", optional = true, markers = "extra == \"format\""}
 webcolors = {version = ">=1.11", optional = true, markers = "extra == \"format\""}
 
@@ -827,6 +830,20 @@ webcolors = {version = ">=1.11", optional = true, markers = "extra == \"format\"
 format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
 format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
 
+[[package]]
+name = "jsonschema-specifications"
+version = "2023.6.1"
+description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "jsonschema_specifications-2023.6.1-py3-none-any.whl", hash = "sha256:3d2b82663aff01815f744bb5c7887e2121a63399b49b104a3c96145474d091d7"},
+    {file = "jsonschema_specifications-2023.6.1.tar.gz", hash = "sha256:ca1c4dd059a9e7b34101cf5b3ab7ff1d18b139f35950d598d629837ef66e8f28"},
+]
+
+[package.dependencies]
+referencing = ">=0.28.0"
+
 [[package]]
 name = "jsonstreams"
 version = "0.6.0"
@@ -847,13 +864,13 @@ test = ["tox"]
 
 [[package]]
 name = "linkml"
-version = "1.5.0"
+version = "1.5.6"
 description = "Linked Open Data Modeling Language"
 optional = false
 python-versions = ">=3.7.6,<4.0.0"
 files = [
-    {file = "linkml-1.5.0-py3-none-any.whl", hash = "sha256:8f8d23f7f7bd6a10a5130d28ea576f7ceccd14e123ad4c0365bb53bc58664ba0"},
-    {file = "linkml-1.5.0.tar.gz", hash = "sha256:120fac9dd5a27d3dabc5e45fdeaf0b2fe187fe5f59bf7bc0806ebb5a884e6942"},
+    {file = "linkml-1.5.6-py3-none-any.whl", hash = "sha256:8036d9ead98d0bf61017e5a2db32ca5b752ab32e338c796c4780118f37293d44"},
+    {file = "linkml-1.5.6.tar.gz", hash = "sha256:54b34ad376c3146eb714e961118ac2a02720ac315d8ab76ca802e5dc479b25fb"},
 ]
 
 [package.dependencies]
@@ -866,12 +883,11 @@ jinja2 = ">=3.1.0"
 jsonasobj2 = ">=1.0.3,<2.0.0"
 jsonschema = {version = ">=4.0.0", extras = ["format"]}
 linkml-dataops = "*"
-linkml-runtime = ">=1.5.0"
-myst-parser = "*"
+linkml-runtime = ">=1.5.4"
 openpyxl = "*"
 parse = "*"
 prefixcommons = ">=0.1.7"
-prefixmaps = ">=0.1.3,<0.2.0"
+prefixmaps = ">=0.1.3"
 pydantic = "*"
 pyjsg = ">=0.11.6"
 pyshex = ">=0.7.20"
@@ -880,15 +896,9 @@ python-dateutil = "*"
 pyyaml = "*"
 rdflib = ">=6.0.0"
 requests = ">=2.22"
-sphinx-click = "*"
-sphinx-rtd-theme = "*"
 sqlalchemy = ">=1.4.31"
-tox = ">=3.25.1,<4.0.0"
 watchdog = ">=0.9.0"
 
-[package.extras]
-docs = ["furo[docs] (>=2022.9.29,<2023.0.0)", "sphinx", "sphinxcontrib-mermaid[docs] (>=0.7.1,<0.8.0)"]
-
 [[package]]
 name = "linkml-dataops"
 version = "0.1.0"
@@ -909,181 +919,128 @@ linkml-runtime = ">=1.1.6"
 
 [[package]]
 name = "linkml-runtime"
-version = "1.5.0"
+version = "1.5.4"
 description = "Runtime environment for LinkML, the Linked open data modeling language"
 optional = false
 python-versions = ">=3.7.6,<4.0.0"
 files = [
-    {file = "linkml_runtime-1.5.0-py3-none-any.whl", hash = "sha256:ddc3d224d9db39be2df33a02718cd75462942009454aca7f828b726129357a37"},
-    {file = "linkml_runtime-1.5.0.tar.gz", hash = "sha256:dd80aec72f6d3226b39415cf4aa8cdda482dc73fcc227f938c6fff72afd80b20"},
+    {file = "linkml_runtime-1.5.4-py3-none-any.whl", hash = "sha256:6fa07516474f3ccecb604b09c25382b87b5058ca09ff5e68084fb09095db191f"},
+    {file = "linkml_runtime-1.5.4.tar.gz", hash = "sha256:b9a6fc6c2af609b91238bad41d15186e4c3166f85ce79fe7e7b62d5493efebbf"},
 ]
 
 [package.dependencies]
 click = "*"
-curies = ">=0.4.0,<0.5.0"
+curies = ">=0.5.4"
 deprecated = "*"
 hbreader = "*"
 json-flattener = ">=0.1.9"
-jsonasobj2 = ">=1.0.4,<2.0.0"
+jsonasobj2 = ">=1.0.4,<2.dev0"
 jsonschema = ">=3.2.0"
 prefixcommons = ">=0.1.12"
 prefixmaps = ">=0.1.4"
+pydantic = ">=1.10.2,<2.0.0"
 pyyaml = "*"
 rdflib = ">=6.0.0"
 requests = "*"
 
-[[package]]
-name = "markdown-it-py"
-version = "2.2.0"
-description = "Python port of markdown-it. Markdown parsing, done right!"
-optional = false
-python-versions = ">=3.7"
-files = [
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-]
-
-[package.dependencies]
-mdurl = ">=0.1,<1.0"
-
-[package.extras]
-benchmarking = ["psutil", "pytest", "pytest-benchmark"]
-code-style = ["pre-commit (>=3.0,<4.0)"]
-compare = ["commonmark (>=0.9,<1.0)", "markdown (>=3.4,<4.0)", "mistletoe (>=1.0,<2.0)", "mistune (>=2.0,<3.0)", "panflute (>=2.3,<3.0)"]
-linkify = ["linkify-it-py (>=1,<3)"]
-plugins = ["mdit-py-plugins"]
-profiling = ["gprof2dot"]
-rtd = ["attrs", "myst-parser", "pyyaml", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinx_book_theme"]
-testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"]
-
 [[package]]
 name = "markupsafe"
-version = "2.1.2"
+version = "2.1.3"
 description = "Safely add untrusted strings to HTML/XML markup."
 optional = false
 python-versions = ">=3.7"
 files = [
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-typing-extensions = ">=3.10"
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 [package.extras]
 dmypy = ["psutil (>=4.0)"]
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-
 [[package]]
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 description = "Neo4j Bolt driver for Python"
 optional = false
 python-versions = ">=3.6"
 files = [
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 [package.dependencies]
@@ -1143,57 +1074,54 @@ pytz = "*"
 
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 test = ["codecov (>=2.1)", "pytest (>=7.2)", "pytest-cov (>=4.0)"]
 
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 iniconfig = "*"
@@ -1601,7 +1499,7 @@ pluggy = ">=0.12,<2.0"
 tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""}
 
 [package.extras]
-testing = ["argcomplete", "hypothesis (>=3.56)", "mock", "nose", "pygments (>=2.7.2)", "requests", "xmlschema"]
+testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "nose", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"]
 
 [[package]]
 name = "pytest-logging"
@@ -1645,13 +1543,13 @@ sortedcontainers = "*"
 
 [[package]]
 name = "pytz"
-version = "2023.2"
+version = "2023.3"
 description = "World timezone definitions, modern and historical"
 optional = false
 python-versions = "*"
 files = [
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 ]
 
 [[package]]
@@ -1792,6 +1690,21 @@ commonmark = ">=0.8.1"
 docutils = ">=0.11"
 sphinx = ">=1.3.1"
 
+[[package]]
+name = "referencing"
+version = "0.29.1"
+description = "JSON Referencing + Python"
+optional = false
+python-versions = ">=3.8"
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+]
+
+[package.dependencies]
+attrs = ">=22.2.0"
+rpds-py = ">=0.7.0"
+
 [[package]]
 name = "requests"
 version = "2.31.0"
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 ]
 
+[[package]]
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+version = "0.8.10"
+description = "Python bindings to Rust's persistent data structures (rpds)"
+optional = false
+python-versions = ">=3.8"
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@@ -1985,20 +2004,20 @@ keepalive = ["keepalive (>=0.5)"]
 
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 imagesize = ">=1.3"
 importlib-metadata = {version = ">=4.8", markers = "python_version < \"3.10\""}
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@@ -2016,7 +2035,7 @@ sphinxcontrib-serializinghtml = ">=1.1.5"
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+test = ["cython", "filelock", "html5lib", "pytest (>=4.6)"]
 
 [[package]]
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@@ -2036,19 +2055,19 @@ sphinx = ">=2.0"
 
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 [package.extras]
 dev = ["bump2version", "sphinxcontrib-httpdomain", "transifex-client", "wheel"]
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+    {file = "SQLAlchemy-2.0.18.tar.gz", hash = "sha256:1fb792051db66e09c200e7bc3bda3b1eb18a5b8eb153d2cedb2b14b56a68b8cb"},
 ]
 
 [package.dependencies]
-greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and (platform_machine == \"win32\" or platform_machine == \"WIN32\" or platform_machine == \"AMD64\" or platform_machine == \"amd64\" or platform_machine == \"x86_64\" or platform_machine == \"ppc64le\" or platform_machine == \"aarch64\")"}
+greenlet = {version = "!=0.4.17", markers = "platform_machine == \"win32\" or platform_machine == \"WIN32\" or platform_machine == \"AMD64\" or platform_machine == \"amd64\" or platform_machine == \"x86_64\" or platform_machine == \"ppc64le\" or platform_machine == \"aarch64\""}
+typing-extensions = ">=4.2.0"
 
 [package.extras]
 aiomysql = ["aiomysql", "greenlet (!=0.4.17)"]
 aiosqlite = ["aiosqlite", "greenlet (!=0.4.17)", "typing-extensions (!=3.10.0.1)"]
 asyncio = ["greenlet (!=0.4.17)"]
-asyncmy = ["asyncmy (>=0.2.3,!=0.2.4)", "greenlet (!=0.4.17)"]
-mariadb-connector = ["mariadb (>=1.0.1,!=1.1.2)"]
+asyncmy = ["asyncmy (>=0.2.3,!=0.2.4,!=0.2.6)", "greenlet (!=0.4.17)"]
+mariadb-connector = ["mariadb (>=1.0.1,!=1.1.2,!=1.1.5)"]
 mssql = ["pyodbc"]
 mssql-pymssql = ["pymssql"]
 mssql-pyodbc = ["pyodbc"]
-mypy = ["mypy (>=0.910)", "sqlalchemy2-stubs"]
-mysql = ["mysqlclient (>=1.4.0)", "mysqlclient (>=1.4.0,<2)"]
+mypy = ["mypy (>=0.910)"]
+mysql = ["mysqlclient (>=1.4.0)"]
 mysql-connector = ["mysql-connector-python"]
-oracle = ["cx-oracle (>=7)", "cx-oracle (>=7,<8)"]
+oracle = ["cx-oracle (>=7)"]
+oracle-oracledb = ["oracledb (>=1.0.1)"]
 postgresql = ["psycopg2 (>=2.7)"]
 postgresql-asyncpg = ["asyncpg", "greenlet (!=0.4.17)"]
-postgresql-pg8000 = ["pg8000 (>=1.16.6,!=1.29.0)"]
+postgresql-pg8000 = ["pg8000 (>=1.29.1)"]
+postgresql-psycopg = ["psycopg (>=3.0.7)"]
 postgresql-psycopg2binary = ["psycopg2-binary"]
 postgresql-psycopg2cffi = ["psycopg2cffi"]
-pymysql = ["pymysql", "pymysql (<1)"]
+postgresql-psycopgbinary = ["psycopg[binary] (>=3.0.7)"]
+pymysql = ["pymysql"]
 sqlcipher = ["sqlcipher3-binary"]
 
 [[package]]
@@ -2289,13 +2304,13 @@ testing = ["flaky (>=3.4.0)", "freezegun (>=0.3.11)", "pathlib2 (>=2.3.3)", "psu
 
 [[package]]
 name = "typing-extensions"
-version = "4.5.0"
+version = "4.7.1"
 description = "Backported and Experimental Type Hints for Python 3.7+"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "typing_extensions-4.5.0-py3-none-any.whl", hash = "sha256:fb33085c39dd998ac16d1431ebc293a8b3eedd00fd4a32de0ff79002c19511b4"},
-    {file = "typing_extensions-4.5.0.tar.gz", hash = "sha256:5cb5f4a79139d699607b3ef622a1dedafa84e115ab0024e0d9c044a9479ca7cb"},
+    {file = "typing_extensions-4.7.1-py3-none-any.whl", hash = "sha256:440d5dd3af93b060174bf433bccd69b0babc3b15b1a8dca43789fd7f61514b36"},
+    {file = "typing_extensions-4.7.1.tar.gz", hash = "sha256:b75ddc264f0ba5615db7ba217daeb99701ad295353c45f9e95963337ceeeffb2"},
 ]
 
 [[package]]
@@ -2311,33 +2326,34 @@ files = [
 
 [[package]]
 name = "uri-template"
-version = "1.2.0"
+version = "1.3.0"
 description = "RFC 6570 URI Template Processor"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
-    {file = "uri_template-1.2.0-py3-none-any.whl", hash = "sha256:f1699c77b73b925cf4937eae31ab282a86dc885c333f2e942513f08f691fc7db"},
-    {file = "uri_template-1.2.0.tar.gz", hash = "sha256:934e4d09d108b70eb8a24410af8615294d09d279ce0e7cbcdaef1bd21f932b06"},
+    {file = "uri-template-1.3.0.tar.gz", hash = "sha256:0e00f8eb65e18c7de20d595a14336e9f337ead580c70934141624b6d1ffdacc7"},
+    {file = "uri_template-1.3.0-py3-none-any.whl", hash = "sha256:a44a133ea12d44a0c0f06d7d42a52d71282e77e2f937d8abd5655b8d56fc1363"},
 ]
 
 [package.extras]
-dev = ["flake8 (<4.0.0)", "flake8-annotations", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-noqa", "flake8-requirements", "flake8-type-annotations", "flake8-use-fstring", "mypy", "pep8-naming"]
+dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-modern-annotations", "flake8-noqa", "flake8-pyproject", "flake8-requirements", "flake8-typechecking-import", "flake8-use-fstring", "mypy", "pep8-naming", "types-PyYAML"]
 
 [[package]]
 name = "urllib3"
-version = "1.26.15"
+version = "2.0.3"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
+python-versions = ">=3.7"
 files = [
-    {file = "urllib3-1.26.15-py2.py3-none-any.whl", hash = "sha256:aa751d169e23c7479ce47a0cb0da579e3ede798f994f5816a74e4f4500dcea42"},
-    {file = "urllib3-1.26.15.tar.gz", hash = "sha256:8a388717b9476f934a21484e8c8e61875ab60644d29b9b39e11e4b9dc1c6b305"},
+    {file = "urllib3-2.0.3-py3-none-any.whl", hash = "sha256:48e7fafa40319d358848e1bc6809b208340fafe2096f1725d05d67443d0483d1"},
+    {file = "urllib3-2.0.3.tar.gz", hash = "sha256:bee28b5e56addb8226c96f7f13ac28cb4c301dd5ea8a6ca179c0b9835e032825"},
 ]
 
 [package.extras]
-brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)", "brotlipy (>=0.6.0)"]
-secure = ["certifi", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "ipaddress", "pyOpenSSL (>=0.14)", "urllib3-secure-extra"]
-socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
+brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)"]
+secure = ["certifi", "cryptography (>=1.9)", "idna (>=2.0.0)", "pyopenssl (>=17.1.0)", "urllib3-secure-extra"]
+socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"]
+zstd = ["zstandard (>=0.18.0)"]
 
 [[package]]
 name = "validators"
@@ -2357,23 +2373,23 @@ test = ["flake8 (>=2.4.0)", "isort (>=4.2.2)", "pytest (>=2.2.3)"]
 
 [[package]]
 name = "virtualenv"
-version = "20.21.0"
+version = "20.23.1"
 description = "Virtual Python Environment builder"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "virtualenv-20.21.0-py3-none-any.whl", hash = "sha256:31712f8f2a17bd06234fa97fdf19609e789dd4e3e4bf108c3da71d710651adbc"},
-    {file = "virtualenv-20.21.0.tar.gz", hash = "sha256:f50e3e60f990a0757c9b68333c9fdaa72d7188caa417f96af9e52407831a3b68"},
+    {file = "virtualenv-20.23.1-py3-none-any.whl", hash = "sha256:34da10f14fea9be20e0fd7f04aba9732f84e593dac291b757ce42e3368a39419"},
+    {file = "virtualenv-20.23.1.tar.gz", hash = "sha256:8ff19a38c1021c742148edc4f81cb43d7f8c6816d2ede2ab72af5b84c749ade1"},
 ]
 
 [package.dependencies]
 distlib = ">=0.3.6,<1"
-filelock = ">=3.4.1,<4"
-platformdirs = ">=2.4,<4"
+filelock = ">=3.12,<4"
+platformdirs = ">=3.5.1,<4"
 
 [package.extras]
-docs = ["furo (>=2022.12.7)", "proselint (>=0.13)", "sphinx (>=6.1.3)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=22.12)"]
-test = ["covdefaults (>=2.2.2)", "coverage (>=7.1)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23)", "pytest (>=7.2.1)", "pytest-env (>=0.8.1)", "pytest-freezegun (>=0.4.2)", "pytest-mock (>=3.10)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)"]
+docs = ["furo (>=2023.5.20)", "proselint (>=0.13)", "sphinx (>=7.0.1)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"]
+test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23.1)", "pytest (>=7.3.1)", "pytest-env (>=0.8.1)", "pytest-freezer (>=0.4.6)", "pytest-mock (>=3.10)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)", "setuptools (>=67.8)", "time-machine (>=2.9)"]
 
 [[package]]
 name = "watchdog"
@@ -2431,13 +2447,13 @@ tests = ["pytest", "pytest-cov"]
 
 [[package]]
 name = "websocket-client"
-version = "1.5.1"
+version = "1.6.1"
 description = "WebSocket client for Python with low level API options"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "websocket-client-1.5.1.tar.gz", hash = "sha256:3f09e6d8230892547132177f575a4e3e73cfdf06526e20cc02aa1c3b47184d40"},
-    {file = "websocket_client-1.5.1-py3-none-any.whl", hash = "sha256:cdf5877568b7e83aa7cf2244ab56a3213de587bbe0ce9d8b9600fc77b455d89e"},
+    {file = "websocket-client-1.6.1.tar.gz", hash = "sha256:c951af98631d24f8df89ab1019fc365f2227c0892f12fd150e935607c79dd0dd"},
+    {file = "websocket_client-1.6.1-py3-none-any.whl", hash = "sha256:f1f9f2ad5291f0225a49efad77abf9e700b6fef553900623060dad6e26503b9d"},
 ]
 
 [package.extras]
@@ -2531,20 +2547,20 @@ files = [
 
 [[package]]
 name = "zipp"
-version = "3.15.0"
+version = "3.16.2"
 description = "Backport of pathlib-compatible object wrapper for zip files"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "zipp-3.15.0-py3-none-any.whl", hash = "sha256:48904fc76a60e542af151aded95726c1a5c34ed43ab4134b597665c86d7ad556"},
-    {file = "zipp-3.15.0.tar.gz", hash = "sha256:112929ad649da941c23de50f356a2b5570c954b65150642bccdd66bf194d224b"},
+    {file = "zipp-3.16.2-py3-none-any.whl", hash = "sha256:679e51dd4403591b2d6838a48de3d283f3d188412a9782faadf845f298736ba0"},
+    {file = "zipp-3.16.2.tar.gz", hash = "sha256:ebc15946aa78bd63458992fc81ec3b6f7b1e92d51c35e6de1c3804e73b799147"},
 ]
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"]
+docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
 
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.9"
-content-hash = "8765d445024e7462da99f5445ebf8784314103f86fbd56b8ac4a7bc2cbd25bff"
+content-hash = "5b0abddc80ec7253bf509ed2da410705f7432f1172fc1e6750459372b6a600ae"
diff --git a/pyproject.toml b/pyproject.toml
index a909944c..cd29186d 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -25,12 +25,12 @@ Sphinx = "*"
 python-dateutil = "^2.8.1"
 prefixcommons = "^0.1.4"
 docutils = "^0.18.1"
-networkx = "^2.8"
+networkx = "*"
 SPARQLWrapper = "^1.8.2"
 pandas = ">1.0.3"
 pytest = "*"
 mypy = "*"
-rdflib = "^6.3.1"
+rdflib = "*"
 Click = "*"
 neo4j = "^4.4.10"
 pyyaml = "*"