Makefile

include translator_dataflow.Makefile
include validation.Makefile
include documentation.Makefile
include linkml.Makefile

MAKEFLAGS += --warn-undefined-variables
SHELL := bash
.SHELLFLAGS := -eu -o pipefail -c
.DEFAULT_GOAL := help
.DELETE_ON_ERROR:
.SUFFIXES:
.SECONDARY:

RUN = poetry run
DOCDIR = docs

.PHONY: all clean

# note: "help" MUST be the first target in the file,
# when the user types "make" they should get help info
help:
	@echo ""
	@echo "make install -- install dependencies"
	@echo "make test -- runs tests including spelling checks and linting checks"
	@echo "make lint -- perform schema linting"
	@echo "make testdoc -- builds docs and runs local test server"
	@echo "make help -- show this help"
	@echo ""

# install any dependencies required for building
install:
	git init
	poetry install
.PHONY: install

all: site
site: gen-project gendoc

test_pr:
	$(RUN) linkml-validate infores_catalog.yaml -s src/information_resource_registry/schema/information_resource_registry.yaml
	$(RUN) pytest
	$(RUN) codespell
	$(RUN) yamllint -c .yamllint-config src/information_resource_registry/schema/*.yaml
	$(RUN) yamllint -c .yamllint-config infores_catalog.yaml

test: check_urls
	$(RUN) linkml-validate infores_catalog.yaml -s src/information_resource_registry/schema/information_resource_registry.yaml
	$(RUN) pytest
	$(RUN) codespell
	$(RUN) yamllint -c .yamllint-config src/information_resource_registry/schema/*.yaml
	$(RUN) yamllint -c .yamllint-config infores_catalog.yaml


clean:
	rm -rf $(DEST)
	rm -rf tmp
	rm -fr docs/*
	rm -fr $(PYMODEL)/*