From bbd2ba46ca7bfa074d61d99e785d19c941439c6d Mon Sep 17 00:00:00 2001
From: kiesers <silas.kieser@gmail.com>
Date: Wed, 19 Aug 2020 17:42:40 +0200
Subject: [PATCH] add old pplacer for osx
 https://github.com/matsen/pplacer/issues/367

---
 recipes/pplacer/1.1.alpha16/build.sh  |  7 +++++
 recipes/pplacer/1.1.alpha16/meta.yaml | 39 +++++++++++++++++++++++++++
 2 files changed, 46 insertions(+)
 create mode 100644 recipes/pplacer/1.1.alpha16/build.sh
 create mode 100644 recipes/pplacer/1.1.alpha16/meta.yaml

diff --git a/recipes/pplacer/1.1.alpha16/build.sh b/recipes/pplacer/1.1.alpha16/build.sh
new file mode 100644
index 0000000000000..bc338633767b8
--- /dev/null
+++ b/recipes/pplacer/1.1.alpha16/build.sh
@@ -0,0 +1,7 @@
+#!/bin/bash
+
+mkdir -p $PREFIX/bin
+
+cd $SRC_DIR
+cp guppy pplacer rppr $PREFIX/bin
+chmod +x $PREFIX/bin/{guppy,pplacer,rppr}
diff --git a/recipes/pplacer/1.1.alpha16/meta.yaml b/recipes/pplacer/1.1.alpha16/meta.yaml
new file mode 100644
index 0000000000000..c4258b8a7000f
--- /dev/null
+++ b/recipes/pplacer/1.1.alpha16/meta.yaml
@@ -0,0 +1,39 @@
+{% set version = "1.1.alpha17" %}
+{% set sha256 = "db1ac64e1bc9b4d24d17ee2e388c061c283ca9fbec075e022bdeaad1adc6d41c" %}
+
+package:
+  name: pplacer
+  version: '{{ version }}'
+
+source:
+  url: https://github.com/matsen/pplacer/releases/download/v{{ version }}/pplacer-Darwin-v{{ version }}.zip
+  sha256: '{{ sha256 }}'
+
+build:
+  skip: true   # [linux]
+  number: 1
+
+requirements:
+  host:
+    - gsl
+  run:
+    - gsl
+    
+test:
+  commands:
+    - pplacer --help > /dev/null
+    - guppy to_csv --help > /dev/null
+    - rppr check --help > /dev/null
+
+about:
+  home: http://matsen.fredhutch.org/pplacer/
+  license: GPL-3.0
+  license_family: GPL
+  summary: Pplacer places query sequences on a fixed reference phylogenetic tree to
+    maximize phylogenetic likelihood or posterior probability according to a reference
+    alignment.
+  dev_url: https://github.com/matsen/pplacer/
+
+extra:
+  skip-lints:
+    - should_be_noarch_generic