diff --git a/recipes/msisensor/build.sh b/recipes/msisensor/build.sh index cf3ebfabe2367..f4d8619bfebda 100644 --- a/recipes/msisensor/build.sh +++ b/recipes/msisensor/build.sh @@ -1,5 +1,9 @@ +#!/bin/bash + +set -xe + CFLAGS="${CFLAGS} ${LDFLAGS}" \ - make \ + make -j"${CPU_COUNT}" \ CXX="${CXX}" CC="${CC}" install -d "${PREFIX}/bin" -install msisensor "${PREFIX}/bin/" +install -m 755 msisensor "${PREFIX}/bin/" diff --git a/recipes/msisensor/meta.yaml b/recipes/msisensor/meta.yaml index 26cbcd7b4aa53..c8ce8442e093c 100644 --- a/recipes/msisensor/meta.yaml +++ b/recipes/msisensor/meta.yaml @@ -1,12 +1,15 @@ +{% set name = "msisensor" %} {% set version = "0.5" %} package: - name: msisensor + name: {{ name }} version: {{ version }} build: skip: True # [osx] - number: 6 + number: 7 + run_exports: + - {{ pin_subpackage(name, max_pin="x.x") }} source: url: https://github.com/niu-lab/msisensor/archive/v{{ version }}.tar.gz @@ -17,15 +20,16 @@ requirements: - make - {{ compiler('c') }} - {{ compiler('cxx') }} - - llvm-openmp # [osx] - - libgomp # [linux] host: - zlib - - openmp + - llvm-openmp # [osx] + - libgomp # [linux] + - bamtools - ncurses run: - zlib - - openmp + - llvm-openmp # [osx] + - libgomp # [linux] - ncurses test: @@ -36,5 +40,10 @@ test: about: home: https://github.com/ding-lab/msisensor license: MIT + license_file: LICENSE summary: MSIsensor is a C++ program to detect replication slippage variants at microsatellite regions, and differentiate them as somatic or germline. + dev_url: https://github.com/ding-lab/msisensor +extra: + additional-platforms: + - linux-aarch64 \ No newline at end of file