From 445b83774c5d9f33e621e95c8de44f51bf105069 Mon Sep 17 00:00:00 2001
From: Liviu <36981384+liviurotiul@users.noreply.github.com>
Date: Wed, 23 Oct 2024 03:10:22 +0300
Subject: [PATCH] Pegas (#49759)

* added meta.yaml

* added sha sum

* added run exports

* changed meta

* solved linting errors

* changed git to source

* version 0.2.13

* fixed meta

* fixed liniting errors

* fixed linting errors

* clean up recipe

---------

Co-authored-by: Joshua Zhuang <71105179+mencian@users.noreply.github.com>
---
 recipes/pegas/meta.yaml | 52 +++++++++++++++++++++++++++++++++++++++++
 1 file changed, 52 insertions(+)
 create mode 100644 recipes/pegas/meta.yaml

diff --git a/recipes/pegas/meta.yaml b/recipes/pegas/meta.yaml
new file mode 100644
index 0000000000000..57b42671e6020
--- /dev/null
+++ b/recipes/pegas/meta.yaml
@@ -0,0 +1,52 @@
+{% set name = "pegas" %}
+{% set version = "0.2.13" %}
+
+package:
+  name: {{ name }}
+  version: {{ version }}
+
+source:
+  url: https://github.com/liviurotiul/PeGAS/archive/refs/tags/v{{ version }}.tar.gz
+  sha256: 2c028caa90bb8825e1c64f2ca5bd5e80f82f6db1cb5c4609bed86157c954c1f8
+
+build:
+  number: 0
+  noarch: python
+  script: "{{ PYTHON }} -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv"
+  run_exports:
+    - {{ pin_subpackage(name, max_pin="x.x") }}
+
+requirements:
+  build:
+    - python >=3.10
+    - pip
+    - setuptools
+  run:
+    - python >=3.10
+    - plotly >=5.0.0
+    - pandas >=1.3.5
+    - tqdm >=4.66.5
+    - matplotlib-base >=3.9.2
+    - networkx >=3.2
+    - snakemake-minimal >=7.32.4
+    - beautifulsoup4 >=4.12.3
+
+test:
+  commands:
+    - {{ name }} --help
+
+about:
+  home: https://github.com/liviurotiul/PeGAS
+  license: GPL-2.0-or-later
+  license_family: GPL
+  license_file: LICENSE
+  summary: "PeGAS is a Snakemake pipeline for genome analysis"
+  description: |
+    PeGAS is a Snakemake pipeline for genome analysis. It is designed to be
+    lightweight, easy to install, and easy to use.
+  doc_url: https://github.com/liviurotiul/PeGAS#readme
+  dev_url: https://github.com/liviurotiul/PeGAS/issues
+
+extra:
+  recipe-maintainers:
+    - liviurotiul