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refactor dwc2parquet job into separate repository #1

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jhpoelen opened this issue Sep 30, 2016 · 2 comments
Open

refactor dwc2parquet job into separate repository #1

jhpoelen opened this issue Sep 30, 2016 · 2 comments

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@jhpoelen
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suggest include namespace prefixes as used here:
https://github.com/iDigBio/idb-backend/blob/master/idb/helpers/fieldnames.py

@mjcollin
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mjcollin commented Oct 1, 2016

Prefixes are ok but I'd like to ask that column names not include ":" or ".". See bio-guoda/guoda-datasets#1

I've been unable to find a trick for working with ":" in column names from the py4j version that ships with Spark 2.0.

@jhpoelen
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jhpoelen commented Oct 4, 2016

@mjcollin ":" and "." are definitely a source of funkiness. Hopefully, we can figure out a way to deal with this without having to change too much in existing jobs.

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