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fix some strange errors only happening for me
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bgruening committed Nov 7, 2024
1 parent 62e0b76 commit 83c8499
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions galaxy/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -176,12 +176,11 @@ RUN mkdir -p /shed_tools $GALAXY_CONFIG_TUS_UPLOAD_STORE \
&& chown $GALAXY_USER:$GALAXY_USER /shed_tools $GALAXY_CONFIG_TUS_UPLOAD_STORE \
&& ln -s /tool_deps/ $EXPORT_DIR/tool_deps \
# Configure Galaxy to use the Tool Shed
&& chown $GALAXY_USER:$GALAXY_USER $EXPORT_DIR/tool_deps \
&& chown $GALAXY_USER:$GALAXY_USER $EXPORT_DIR/tool_deps $GALAXY_VIRTUAL_ENV -R \
&& ansible-playbook /ansible/provision.yml \
--extra-vars galaxy_server_dir=$GALAXY_ROOT_DIR \
--extra-vars galaxy_venv_dir=$GALAXY_VIRTUAL_ENV \
--extra-vars galaxy_logs_dir=$GALAXY_LOGS_DIR \
--extra-vars galaxy_user_name=$GALAXY_USER \
--extra-vars galaxy_config_file=$GALAXY_CONFIG_FILE \
--extra-vars galaxy_config_dir=$GALAXY_CONFIG_DIR \
--extra-vars gravity_config_file=$GRAVITY_CONFIG_FILE \
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