From 87db5d231eb8a67c01881a6793a02aea7e7d08c6 Mon Sep 17 00:00:00 2001
From: jvfe <jvfecav@gmail.com>
Date: Thu, 27 Jun 2024 09:31:51 -0300
Subject: [PATCH] refact: Add performance parameters to iqtree

---
 conf/modules.config | 1 +
 1 file changed, 1 insertion(+)

diff --git a/conf/modules.config b/conf/modules.config
index 4b68380..cf529bc 100755
--- a/conf/modules.config
+++ b/conf/modules.config
@@ -389,6 +389,7 @@ process {
 
     // phylogenomics
     withName: IQTREE {
+        ext.args = '-m HKY+F+G+ASC -fast'
         publishDir = [
             path: { "${params.outdir}/phylogenomics/iqtree" },
             mode: params.publish_dir_mode,