diff --git a/modules/local/samplesheet_check.nf b/modules/local/samplesheet_check.nf index 20542d9..9010b40 100644 --- a/modules/local/samplesheet_check.nf +++ b/modules/local/samplesheet_check.nf @@ -46,9 +46,6 @@ process ASSEMBLYSHEET_CHECK { process PHYLOSHEET_CHECK { tag "$phylosheet" - publishDir "${params.outdir}", - mode: params.publish_dir_mode, - saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:'pipeline_info', publish_id:'') } conda (params.enable_conda ? "conda-forge::python=3.8.3" : null) if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {