rigi_pulldown.conf

# mda5_pulldown.conf

karyotype = karyotype.listeria.rigi.txt

<ideogram>

<spacing>
default = 0.005r
</spacing>

# Ideogram position, fill and outline

radius           = 0.80r
thickness        = 20p
fill             = yes
stroke_color     = dgrey
stroke_thickness = 2p

# Minimum definition for ideogram labels.

show_label       = yes
# see etc/fonts.conf for list of font names
label_font       = default 
label_radius     = 1r + 75p
label_size       = 30
label_parallel   = yes

</ideogram>


<links>

<link>
file          = ..\Results\RIGIEvsCherryE.bed
color         = black_a5
radius        = 0.92r
bezier_radius = 0.1r
thickness     = 5
</link>

</links>


<highlights>

z = 0
fill_color = green

<highlight>
file       = ..\Results\RIGIEvsCherryE_highlight.conf
r0         = 0.95r + 30p
r1         = 0.95r
</highlight>

</highlights>


################################################################
# The remaining content is standard and required. It is imported 
# from default files in the Circos distribution.
#
# These should be present in every Circos configuration file and
# overridden as required. To see the content of these files, 
# look in etc/ in the Circos distribution.

<image>
# Included from Circos distribution.
<<include etc/image.conf>>
</image>

# RGB/HSV color definitions, color lists, location of fonts, fill patterns.
# Included from Circos distribution.
<<include etc/colors_fonts_patterns.conf>>

# Debugging, I/O an dother system parameters
# Included from Circos distribution.
<<include etc/housekeeping.conf>>