From 95fe7024c22c4781d71d7be5462d090e9d4d74ba Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Boris=20Cl=C3=A9net?= Date: Tue, 17 Oct 2023 11:00:54 +0200 Subject: [PATCH] Group analysis workflow bug --- narps_open/pipelines/team_08MQ.py | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/narps_open/pipelines/team_08MQ.py b/narps_open/pipelines/team_08MQ.py index 1ba66c62..d5919a4f 100644 --- a/narps_open/pipelines/team_08MQ.py +++ b/narps_open/pipelines/team_08MQ.py @@ -734,15 +734,15 @@ def get_group_level_analysis_sub_workflow(self, method): base_dir = self.directories.working_dir, name = f'group_level_analysis_{method}_nsub_{nb_subjects}' ) - """group_level_analysis.connect([ - (info_source, select_files, [('contrast_id', 'contrast_id')]), - (info_source, subgroups_contrasts, [('subject_list', 'subject_ids')]), + group_level_analysis.connect([ + (info_source, select_files, [('contrast_id', 'contrast_id')]) + """(info_source, subgroups_contrasts, [('subject_list', 'subject_ids')]), (select_files, subgroups_contrasts, [ ('cope', 'copes'), ('varcope', 'varcopes'), ('participants', 'participants_file'), - ]) - ])""" + ])""" + ]) # [INFO] Here we define the contrasts used for the group level analysis, depending on the # method used.