Releases: bcgsc/pori_graphkb_loader
Releases · bcgsc/pori_graphkb_loader
v6.2.0
New Features
- MOAlmanac loader
- GraphKB connection config arguments to snakemake pipeline
BugFixes
- set NODE_PATH to accommodate singularity user of docker container
- cosmic loader: fix typo in classification filename
Improvements
- Support node 16, default to node 16
- Add tests for graphkb module
v6.1.0
v6.0.0
Breaking Changes
- civic loader now uses its own subparser menu
New Features
- civic: Add trusted curator as option
- asco: Add loader to pull ASCO abstract record information from their API
- #20 civic: Sync deleted items
- #19, #25 civic: Support additional relevance terms
BugFixes
- civic: Do not require disease for statement
- ncit: Fix subclass relationship loader error
Improvements
- performance improvements to graphkb and disease ontology modules
v5.2.0
v5.1.0
New Features
- Adds snakemake workflow to run loaders on a new/empty GraphKB DB instance
- PMC4232638: Adds loader for PMC4232638 supplementary file
- Adds General Variant loader
BugFixes
- docm: fixes outdated graphkb loading syntax
- ensembl: update the loader to use new file headers
- cgi: Fix more mispellings in source KB (CGI) on load
Improvements
- ncit: reject non-human species dup when it shares a name with a human term
- refseq: add max concurrent requests limit to loading refseq rec
- api: do not update records field from one null-like type to another
- cgi: Load statements for ASCO/AACR from CGI