- HPO API updated to current version
- Gene4Epilepsy gene lists: e.g.
get_gene_list('G4E:ALL') - HGNC gene lists: e.g.
get_gene_list('HGNC:protein-coding') - Caching of all files the rely on web resources
- Option
read_only_cache_dirto allow shared cavalier cache directory: e.g.set_cavalier_opt(read_only_cache_dir = '/PATH/TO/DIR') - All URLs to remote resources as options that can be changed in case they move
- Roxygen function documentation to many functions
- improve compound heterozygous detection in
inheritance.R - moved Dockerfile to this repository from nf-cavalier to streamline building docker container
- RVIS scores as outdated and certificate has expired on download page