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mypy report #741

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fjammes opened this issue Sep 6, 2023 · 0 comments
Open

mypy report #741

fjammes opened this issue Sep 6, 2023 · 0 comments
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code quality
Milestone
3.2

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@fjammes
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fjammes commented Sep 6, 2023 •
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Describe the issue
Numerous mypy error.

Actual behaviour

Here is the mypy output:

fink-broker/setup.py:15: error: Skipping analyzing "setuptools": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/tester.py:108: error: Argument 2 to "set" of "RuntimeConfig" has incompatible type "int"; expected "str"  [arg-type]
fink-broker/fink_broker/avroUtils.py:29: error: Name "io._io.BytesIO" is not defined  [name-defined]
fink-broker/fink_broker/avroUtils.py:59: error: Name "io._io.BytesIO" is not defined  [name-defined]
fink-broker/fink_broker/avroUtils.py:59: error: Name "fastavro._read.reader" is not defined  [name-defined]
fink-broker/fink_broker/tracklet_identification.py:25: error: Skipping analyzing "astropy.coordinates": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/tracklet_identification.py:26: error: Skipping analyzing "astropy.time": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/tracklet_identification.py:125: error: Argument 1 has incompatible type "Callable[[DataFrame], DataFrame]"; expected "Union[Callable[[DataFrameLike], DataFrameLike], Callable[[Any, DataFrameLike], DataFrameLike]]"  [arg-type]
fink-broker/fink_broker/sparkUtils.py:20: error: Module "pyspark.sql.column" has no attribute "_to_java_column"  [attr-defined]
fink-broker/fink_broker/sparkUtils.py:61: error: "type[SparkContext]" has no attribute "_active_spark_context"  [attr-defined]
fink-broker/fink_broker/sparkUtils.py:105: error: "type[SparkContext]" has no attribute "_active_spark_context"  [attr-defined]
fink-broker/fink_broker/sparkUtils.py:139: error: "DataFrameLike" has no attribute "to_csv"  [attr-defined]
fink-broker/fink_broker/sparkUtils.py:144: error: Incompatible default for argument "shuffle_partitions" (default has type "None", argument has type "int")  [assignment]
fink-broker/fink_broker/sparkUtils.py:144: note: PEP 484 prohibits implicit Optional. Accordingly, mypy has changed its default to no_implicit_optional=True
fink-broker/fink_broker/sparkUtils.py:144: note: Use https://github.com/hauntsaninja/no_implicit_optional to automatically upgrade your codebase
fink-broker/fink_broker/sparkUtils.py:178: error: Argument 2 to "set" of "RuntimeConfig" has incompatible type "int"; expected "str"  [arg-type]
fink-broker/fink_broker/sparkUtils.py:204: error: "type[SparkContext]" has no attribute "_active_spark_context"  [attr-defined]
fink-broker/fink_broker/sparkUtils.py:205: error: "type[SparkContext]" has no attribute "_active_spark_context"  [attr-defined]
fink-broker/fink_broker/sparkUtils.py:273: error: Incompatible types in assignment (expression has type "DataFrame", variable has type "DataStreamReader")  [assignment]
fink-broker/fink_broker/sparkUtils.py:278: error: Incompatible return value type (got "DataStreamReader", expected "DataFrame")  [return-value]
fink-broker/fink_broker/sparkUtils.py:346: error: Incompatible types in assignment (expression has type "float", variable has type "int")  [assignment]
fink-broker/fink_broker/sparkUtils.py:364: error: "SparkSession" has no attribute "_jvm"  [attr-defined]
fink-broker/fink_broker/sparkUtils.py:365: error: "SparkSession" has no attribute "_jsc"  [attr-defined]
fink-broker/fink_broker/slackUtils.py:139: error: "Column" not callable  [operator]
fink-broker/fink_broker/slackUtils.py:198: error: Argument 1 to "filter" of "DataFrame" has incompatible type "bool"; expected "Union[Column, str]"  [arg-type]
fink-broker/fink_broker/science.py:22: error: Skipping analyzing "healpy": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:28: error: Skipping analyzing "fink_utils.spark.utils": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:41: error: Skipping analyzing "fink_science.random_forest_snia.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:42: error: Skipping analyzing "fink_science.xmatch.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:46: error: Skipping analyzing "fink_science.snn.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:47: error: Skipping analyzing "fink_science.microlensing.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:48: error: Skipping analyzing "fink_science.asteroids.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:49: error: Skipping analyzing "fink_science.nalerthist.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:50: error: Skipping analyzing "fink_science.kilonova.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:51: error: Skipping analyzing "fink_science.ad_features.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:52: error: Skipping analyzing "fink_science.anomaly_detection.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:56: error: Skipping analyzing "fink_science.cats.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:57: error: Skipping analyzing "fink_science.agn.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:58: error: Skipping analyzing "fink_science.slsn.processor": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/science.py:74: error: Argument 1 has incompatible type "Callable[[Series[Any], Series[Any], Series[Any]], Series[Any]]"; expected "Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]]"  [arg-type]
fink-broker/fink_broker/science.py:107: error: Argument 1 to "dec2theta" has incompatible type "Union[ExtensionArray, ndarray[Any, Any]]"; expected "float"  [arg-type]
fink-broker/fink_broker/science.py:108: error: Argument 1 to "ra2phi" has incompatible type "Union[ExtensionArray, ndarray[Any, Any]]"; expected "float"  [arg-type]
fink-broker/fink_broker/science.py:112: error: Argument 1 has incompatible type "Callable[[Series[Any], Series[Any], Series[Any]], Series[Any]]"; expected "Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]]"  [arg-type]
fink-broker/fink_broker/science.py:149: error: Argument 1 to "dec2theta" has incompatible type "Union[ExtensionArray, ndarray[Any, Any]]"; expected "float"  [arg-type]
fink-broker/fink_broker/science.py:150: error: Argument 1 to "ra2phi" has incompatible type "Union[ExtensionArray, ndarray[Any, Any]]"; expected "float"  [arg-type]
fink-broker/fink_broker/science.py:160: error: No overload variant of "pandas_udf" matches argument types "MapType", "Literal[200]"  [call-overload]
fink-broker/fink_broker/science.py:160: note: Possible overload variants:
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]], returnType: Union[Union[AtomicType, str], ArrayType], functionType: Literal[200]) -> UserDefinedFunctionLike
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Union[AtomicType, str], ArrayType], returnType: Literal[200]) -> Callable[[Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Union[AtomicType, str], ArrayType], *, functionType: Literal[200]) -> Callable[[Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(*, returnType: Union[Union[AtomicType, str], ArrayType], functionType: Literal[200]) -> Callable[[Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[PandasVariadicScalarToStructFunction, Callable[[Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike]], returnType: Union[StructType, str], functionType: Literal[200]) -> UserDefinedFunctionLike
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], returnType: Literal[200]) -> Callable[[Union[PandasVariadicScalarToStructFunction, Callable[[Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], *, functionType: Literal[200]) -> Callable[[Union[PandasVariadicScalarToStructFunction, Callable[[Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(*, returnType: Union[StructType, str], functionType: Literal[200]) -> Callable[[Union[PandasVariadicScalarToStructFunction, Callable[[Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], DataFrameLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Callable[[Iterable[Union[Union[DataFrameLike, SeriesLike], tuple[Union[DataFrameLike, SeriesLike], ...]]]], Iterable[SeriesLike]], returnType: Union[Union[AtomicType, str], ArrayType], functionType: Literal[204]) -> UserDefinedFunctionLike
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Union[AtomicType, str], ArrayType], returnType: Literal[204]) -> Callable[[Callable[[Iterable[Union[Union[DataFrameLike, SeriesLike], tuple[Union[DataFrameLike, SeriesLike], ...]]]], Iterable[SeriesLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(*, returnType: Union[Union[AtomicType, str], ArrayType], functionType: Literal[204]) -> Callable[[Callable[[Iterable[Union[Union[DataFrameLike, SeriesLike], tuple[Union[DataFrameLike, SeriesLike], ...]]]], Iterable[SeriesLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Union[AtomicType, str], ArrayType], *, functionType: Literal[204]) -> Callable[[Callable[[Iterable[Union[Union[DataFrameLike, SeriesLike], tuple[Union[DataFrameLike, SeriesLike], ...]]]], Iterable[SeriesLike]]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Callable[[DataFrameLike], DataFrameLike], Callable[[Any, DataFrameLike], DataFrameLike]], returnType: Union[StructType, str], functionType: Literal[201]) -> GroupedMapPandasUserDefinedFunction
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], returnType: Literal[201]) -> Callable[[Union[Callable[[DataFrameLike], DataFrameLike], Callable[[Any, DataFrameLike], DataFrameLike]]], GroupedMapPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(*, returnType: Union[StructType, str], functionType: Literal[201]) -> Callable[[Union[Callable[[DataFrameLike], DataFrameLike], Callable[[Any, DataFrameLike], DataFrameLike]]], GroupedMapPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], *, functionType: Literal[201]) -> Callable[[Union[Callable[[DataFrameLike], DataFrameLike], Callable[[Any, DataFrameLike], DataFrameLike]]], GroupedMapPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Callable[[SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], PandasVariadicGroupedAggFunction], returnType: Union[Union[AtomicType, str], ArrayType], functionType: Literal[202]) -> UserDefinedFunctionLike
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Union[AtomicType, str], ArrayType], returnType: Literal[202]) -> Callable[[Union[Callable[[SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], PandasVariadicGroupedAggFunction]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(*, returnType: Union[Union[AtomicType, str], ArrayType], functionType: Literal[202]) -> Callable[[Union[Callable[[SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], PandasVariadicGroupedAggFunction]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[Union[AtomicType, str], ArrayType], *, functionType: Literal[202]) -> Callable[[Union[Callable[[SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], Callable[[SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike, SeriesLike], Union[bool, float, int, str]], PandasVariadicGroupedAggFunction]], UserDefinedFunctionLike]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Callable[[Iterable[DataFrameLike]], Iterable[DataFrameLike]], returnType: Union[StructType, str], functionType: Literal[205]) -> MapIterPandasUserDefinedFunction
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], returnType: Literal[205]) -> Callable[[Callable[[Iterable[DataFrameLike]], Iterable[DataFrameLike]]], MapIterPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(*, returnType: Union[StructType, str], functionType: Literal[205]) -> Callable[[Callable[[Iterable[DataFrameLike]], Iterable[DataFrameLike]]], MapIterPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], *, functionType: Literal[205]) -> Callable[[Callable[[Iterable[DataFrameLike]], Iterable[DataFrameLike]]], MapIterPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Callable[[DataFrameLike, DataFrameLike], DataFrameLike], returnType: Union[StructType, str], functionType: Literal[206]) -> CogroupedMapPandasUserDefinedFunction
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], returnType: Literal[206]) -> Callable[[Callable[[DataFrameLike, DataFrameLike], DataFrameLike]], CogroupedMapPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(*, returnType: Union[StructType, str], functionType: Literal[206]) -> Callable[[Callable[[DataFrameLike, DataFrameLike], DataFrameLike]], CogroupedMapPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:160: note:     def pandas_udf(f: Union[StructType, str], *, functionType: Literal[206]) -> Callable[[Callable[[DataFrameLike, DataFrameLike], DataFrameLike]], CogroupedMapPandasUserDefinedFunction]
fink-broker/fink_broker/science.py:304: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:304: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:315: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:315: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:315: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:317: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:322: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:322: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:322: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:324: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:346: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:347: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:348: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:445: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:445: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:446: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:446: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:447: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:448: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:449: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:455: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:456: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:456: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:456: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:456: error: List item 3 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:457: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:457: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:457: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:458: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:458: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:458: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:459: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:463: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:464: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:464: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:464: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:464: error: List item 3 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:465: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:465: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:465: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:466: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:466: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:466: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:467: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:477: error: Argument 1 to "create_map" has incompatible type "list[Column]"; expected "Union[Column, str]"  [arg-type]
fink-broker/fink_broker/science.py:485: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:485: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:485: error: List item 2 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:486: error: List item 0 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:486: error: List item 1 has incompatible type "Column"; expected "str"  [list-item]
fink-broker/fink_broker/science.py:496: error: Argument 1 to "create_map" has incompatible type "list[Column]"; expected "Union[Column, str]"  [arg-type]
fink-broker/fink_broker/partitioning.py:21: error: Skipping analyzing "astropy.time": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/partitioning.py:25: error: Argument 1 has incompatible type "Callable[[Series[Any], Any, Any], Any]"; expected "Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]]"  [arg-type]
fink-broker/fink_broker/partitioning.py:70: error: Argument 1 has incompatible type "Callable[[Series[Any], Any], Series[Any]]"; expected "Union[PandasVariadicScalarToScalarFunction, Callable[[Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike], Callable[[Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike], Union[DataFrameLike, SeriesLike]], SeriesLike]]"  [arg-type]
fink-broker/fink_broker/hbaseUtils.py:28: error: Skipping analyzing "fink_science": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/hbaseUtils.py:30: error: Skipping analyzing "fink_science.t2.utilities": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/hbaseUtils.py:31: error: Skipping analyzing "fink_science.xmatch.utils": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/test_schema_converter.py:24: error: Skipping analyzing "fink_utils.spark.schema_converter": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/fink_broker/distributionUtils.py:64: error: Argument 1 to "struct" has incompatible type "list[str]"; expected "Union[Column, str]"  [arg-type]
fink-broker/fink_broker/distributionUtils.py:76: error: Argument 1 to "to_avro" has incompatible type "str"; expected "Column"  [arg-type]
fink-broker/bin/raw2science_batch.py:30: error: Skipping analyzing "fink_science": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/raw2science.py:40: error: Skipping analyzing "fink_science": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/push_to_tns.py:27: error: Skipping analyzing "fink_filters.classification": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/push_to_tns.py:29: error: Skipping analyzing "fink_tns.utils": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/push_to_tns.py:30: error: Skipping analyzing "fink_tns.report": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/object_archival.py:32: error: Skipping analyzing "fink_utils.hbase.utils": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/index_archival.py:44: error: Skipping analyzing "fink_filters.classification": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/index_archival.py:46: error: Skipping analyzing "fink_tns.utils": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/index_archival.py:48: error: Skipping analyzing "astropy.coordinates": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/index_archival.py:49: error: Skipping analyzing "astropy": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/download_tns.py:20: error: Skipping analyzing "fink_tns.utils": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/daily_stats.py:28: error: Skipping analyzing "fink_filters.classification": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/checkstream.py:23: error: Skipping analyzing "fink_broker.monitoring": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/anomaly_archival.py:24: error: Skipping analyzing "fink_filters.filter_anomaly_notification.filter": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/anomaly_archival.py:24: note: See https://mypy.readthedocs.io/en/stable/running_mypy.html#missing-imports
fink-broker/bin/distribute_elasticc.py:29: error: Skipping analyzing "fink_science": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/distribute.py:27: error: Skipping analyzing "fink_utils.spark": module is installed, but missing library stubs or py.typed marker  [import]
fink-broker/bin/distribute.py:33: error: Skipping analyzing "fink_utils.spark.utils": module is installed, but missing library stubs or py.typed marker  [import]
Found 121 errors in 22 files (checked 31 source files)

To Reproduce

cd <fink-broker-src>
DIR=$PWD
export MINIMAL=true
export NOSCIENCE=true
. ./conf.sh
docker run -it  "$IMAGE" bash
/home/fink/miniconda/bin/python -m pip install pandas-stubs types-requests types-openpyxl pyspark-stubs
mypy --install-types /home/fink/fink-broker/
@JulienPeloton JulienPeloton modified the milestones: 3.1, 3.2 Sep 6, 2023
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@fjammes @JulienPeloton