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Tests for particle diffusion#2209

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jlubo wants to merge 17 commits intoarbor-sim:masterarbor-sim/arbor:masterfrom jlubo:tests_for_particle_diffusionjlubo/arbor:tests_for_particle_diffusionCopy head branch name to clipboard

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Commits on Aug 24, 2023

• Tests for particle diffusion added (for different morphologies; also pointing to the fact that the diffusion across segments of different radius is still erroneous; see arbor-sim#2145)

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  85486cf

• Black style formatting applied

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  6062daf

• Black style formatting (v23.7.0) applied

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  890f315

• Cleanup

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  1bd43cc

• Black reformatting

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  72b0d61

• Revision: list of dictionaries for stimulation added; small improvements

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  5b9ecd3

• Split function to reduce complexity (following flake8 complaint)

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• Black style applied

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Commits on Aug 25, 2023

• Revision: discretization policy simplified

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Commits on Sep 27, 2023

• tests for different segment length added (also fail as of v0.9.0); code readability improved

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  0bcc339

• Merge branch 'master' into tests_for_particle_diffusion

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Commits on Oct 7, 2023

• fix: apply 'estimated' tests only if radius is fixed

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Commits on Oct 10, 2023

• disabled 'test_diffusion_different_length' and 'test_diffusion_different_radii' again (for as long as the related fix is not merged)

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Commits on Oct 12, 2023

• generalized tests for 'estimated' equilibrium values; annotations added

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• Merge branch 'master' into tests_for_particle_diffusion

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  b334f29

Commits on Oct 14, 2023

• fixed estimated values in two segment-case

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  da87dea

• split function 'get_morph_and_decor()' into special cases for 1,2,3 segments

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  e72bace