KIRBY21 BIDS converter #1108
Workflow file for this run
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name: Non Regression Tests - Converters | |
on: | |
push: | |
branches: ["dev", "maint-*"] | |
pull_request: | |
branches: ["dev", "maint-*"] | |
permissions: | |
contents: read | |
concurrency: | |
group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}' | |
cancel-in-progress: true | |
env: | |
POETRY_VERSION: '1.6.1' | |
PYTHON_VERSION: '3.10' | |
jobs: | |
test-converters-MacOS: | |
runs-on: | |
- self-hosted | |
- macOS | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: snok/install-poetry@v1 | |
with: | |
version: ${{ env.POETRY_VERSION }} | |
virtualenvs-create: false | |
- name: Run non-regression tests for converters | |
run: | | |
make env.conda | |
source ~/miniconda3/etc/profile.d/conda.sh | |
conda activate "${{ github.workspace }}"/env | |
make install | |
cd test | |
poetry run pytest --verbose \ | |
--working_directory=/Volumes/data/working_dir_mac \ | |
--input_data_directory=/Volumes/data_ci \ | |
--basetemp=/Volumes/data/tmp \ | |
--junitxml=./test-reports/run_converters_mac.xml \ | |
--disable-warnings \ | |
./nonregression/iotools/test_run_converters.py | |
- name: Clean | |
run: | | |
rm -rf /Volumes/data/tmp | |
rm -rf /Volumes/data/working_dir_mac | |
test-converters-Linux: | |
runs-on: | |
- self-hosted | |
- Linux | |
- test-runner | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: snok/install-poetry@v1 | |
with: | |
version: ${{ env.POETRY_VERSION }} | |
virtualenvs-create: false | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ env.PYTHON_VERSION }} | |
cache: poetry | |
- name: Run non-regression tests for converters | |
run: | | |
make env.conda | |
source /builds/miniconda/etc/profile.d/conda.sh | |
conda activate "${{ github.workspace }}"/env | |
make install | |
cd test | |
poetry run pytest --verbose \ | |
--working_directory=/mnt/data/ci/working_dir_linux \ | |
--input_data_directory=/mnt/data_ci \ | |
--basetemp=/mnt/data/ci/tmp \ | |
--junitxml=./test-reports/run_converters_linux.xml \ | |
--disable-warnings \ | |
./nonregression/iotools/test_run_converters.py | |
- name: Clean | |
run: | | |
rm -rf /mnt/data/ci/tmp | |
rm -rf /mnt/data/ci/working_dir_linux |