This directory contains the guidelines and steps to generic experiments for Alzheimer’s disease classification from clinical and neuroimaging data. The data is obtained from ADNI dataset. It is developed by the ARAMIS Lab.
We assume that you have installed all the dependencies of Clinica software platform and downloaded the ADNI original data.
Please follow carefully the steps for the installation of Clinica, present in the documentation available at: https://github.com/aramis-lab/AD-ML/wiki
We suggest to use an isolated Conda environment to avoid conflicts with previous versions of libraries already installed in your computer.
One you have installed the right version of Clinica (in order to reproduce these experiments). You can run the notebook presented in this folder.
conda activate MY_CLINICA_env
git clone https://github.com/aramis-lab/AD-ML.git
git checkout master
cd Generic_Version
jupyter notebook Experiments.ipynb