setup.py

from setuptools import setup, find_packages


"""
Instructions for creating a release of the scispacy library.

1. Make sure your working directory is clean.
2. Make sure that you have changed the versions in "scispacy/version.py".
3. Create the distribution by running "python setup.py sdist" in the root of the repository.
4. Check you can install the new distribution in a clean environment.
5. Upload the distribution to pypi by running "twine upload <path to the distribution> -u <username> -p <password>".
   This step will ask you for a username and password - the username is "scispacy" you can
   get the password from LastPass.
"""

VERSION = {}
# version.py defines VERSION and VERSION_SHORT variables.
# We use exec here to read it so that we don't import scispacy
# whilst setting up the package.
with open("scispacy/version.py", "r") as version_file:
    exec(version_file.read(), VERSION)

setup(
    name="scispacy",
    version=VERSION["VERSION"],
    url="https://allenai.github.io/scispacy/",
    author="Allen Institute for Artificial Intelligence",
    author_email="ai2-info@allenai.org",
    description="A full SpaCy pipeline and models for scientific/biomedical documents.",
    long_description=open("README.md").read(),
    long_description_content_type="text/markdown",
    keywords=["bioinformatics nlp spacy SpaCy biomedical"],
    classifiers=[
        "Intended Audience :: Science/Research",
        "Development Status :: 3 - Alpha",
        "License :: OSI Approved :: Apache Software License",
        "Programming Language :: Python :: 3.6",
        "Topic :: Scientific/Engineering :: Artificial Intelligence",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
    ],
    packages=find_packages(exclude=["*.tests", "*.tests.*", "tests.*", "tests"]),
    license="Apache",
    install_requires=[
        "spacy>=3.7.0,<3.8.0",
        "scipy",
        "requests>=2.0.0,<3.0.0",
        "conllu",
        "numpy",
        "joblib",
        "nmslib>=1.7.3.6; python_version < '3.11'",
        "nmslib-metabrainz==2.1.3; python_version >= '3.11'",
        "scikit-learn>=0.20.3",
        "pysbd",
    ],
    tests_require=["pytest", "pytest-cov", "flake8", "black", "mypy"],
    python_requires=">=3.6.0",
)