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eprint_ALS.json
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eprint_ALS.json
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[
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep10_S22_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep11_S23_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep12_S24_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep1_S13_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep2_S14_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep3_S15_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep4_S16_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep5_S17_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep6_S18_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep7_S19_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep8_S20_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_ep9_S21_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
"fastq_r2": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/10774_ep/10774_inpA_S1_R2_001.fastq.gz",
"adapters": [
"NNNNNAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"CTTCCGATCTTGGTCCT",
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"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
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"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
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"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
"Eprint.samples": {
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"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
"Eprint.hg19_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/HG19.tar",
"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
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"CTTCCGATCTACAAGTT",
"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
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"CTTCCGATCTTGGTCCT",
"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
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"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
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}
},
{
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"Eprint.hg19_dup_tar": "/groups/cgsd/alexandre/EPRINT_workflow/inputs/REP.tar",
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"CTTCCGATCTACAAGTT",
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"AACTTGTAGATCGGA",
"AGGACCAAGATCGGA",
"ACTTGTAGATCGGAA",
"GGACCAAGATCGGAA",
"CTTGTAGATCGGAAG",
"GACCAAGATCGGAAG",
"TTGTAGATCGGAAGA",
"ACCAAGATCGGAAGA",
"TGTAGATCGGAAGAG",
"CCAAGATCGGAAGAG",
"GTAGATCGGAAGAGC",
"CAAGATCGGAAGAGC",
"TAGATCGGAAGAGCG",
"AAGATCGGAAGAGCG",
"AGATCGGAAGAGCGT",
"GATCGGAAGAGCGTC",
"ATCGGAAGAGCGTCG",
"TCGGAAGAGCGTCGT",
"CGGAAGAGCGTCGTG",
"GGAAGAGCGTCGTGT"
],
"bc_pattern": "NNNNNNNNNN"
}
}
]