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<img width="16" height="16" src="http://www.admb-project.org/exe.png" alt="File application/x-msdos-program" />
<span>EXE</span>
</a>
</li>
<li class="navTreeItem visualNoMarker section-admb_mcmc">
<a href="mcmcmc/admb_mcmc/view.html" class="state-missing-value contenttype-file" title="Plot of samples using MCMC">
<img width="16" height="16" src="http://www.admb-project.org/image.png" alt="File C source code" />
<span>ADMB_MCMC</span>
</a>
</li>
<li class="navTreeItem visualNoMarker section-mcmcmc">
<a href="mcmcmc/mcmcmc/view.html" class="state-missing-value contenttype-file" title="Plot of samples using Metropolis Coupled MCMC (MCMCMC)">
<img width="16" height="16" src="http://www.admb-project.org/image.png" alt="File C source code" />
<span>MCMCMC</span>
</a>
</li>
<li class="navTreeItem visualNoMarker section-mcmcmc-trace">
<a href="mcmcmc/mcmcmc-trace/view.html" class="state-missing-value contenttype-file" title="Traceplot for MCMCMC sampling">
<img width="16" height="16" src="http://www.admb-project.org/image.png" alt="File" />
<span>MCMCMC Trace</span>
</a>
</li>
</ul>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-a-general-r-admb-interface-for-mixed-models">
<a href="a-general-r-admb-interface-for-mixed-models.html" class="state-published navTreeFolderish contenttype-folder" title="Explains how to set up a general mixed model interface between R and ADMB used for instance in glmmADMB">
<span>R - ADMB interface for mixed models</span>
</a>
</li>
</ul>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-simple-examples">
<a href="../simple-examples.html" class="state-published navTreeFolderish contenttype-folder" title="">
<span>Simple examples</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-sampling">
<a href="../sampling.html" class="state-published navTreeFolderish contenttype-folder" title="Survey sampling related examples">
<span>Sampling</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-spatial-models">
<a href="../spatial-models.html" class="state-published navTreeFolderish contenttype-folder" title="ADMB supports both the geostatistical approach and Gaussian Markov random field approach to spatial modelling
">
<span>Spatial models</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-state-space-models">
<a href="../state-space-models.html" class="state-published navTreeFolderish contenttype-folder" title="">
<span>State-space models</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-survival-analysis">
<a href="../survival-analysis.html" class="state-published navTreeFolderish contenttype-folder" title="Lifetime data and survival analysis">
<span>Survival analysis</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-text-books">
<a href="../text-books.html" class="state-published navTreeFolderish contenttype-folder" title="Collections of examples taken from text books">
<span>Text books</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-winbugs">
<a href="../winbugs.html" class="state-published navTreeFolderish contenttype-folder" title="Comparison with the software package WinBUGS">
<span>WinBUGS</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-miscellaneous">
<a href="../miscellaneous.html" class="state-published navTreeFolderish contenttype-folder" title="Stuff that is hard to categorize, but still is useful">
<span>Miscellaneous</span>
</a>
</li>
<li class="navTreeItem visualNoMarker navTreeFolderish section-storage">
<a href="../storage.html" class="state-published navTreeFolderish contenttype-folder" title="Physical storage of individual examples with guarantied permanent URL">
<span>Storage</span>
</a>
</li>
</ul>
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<span class="portletBottomRight"></span>
</dd>
</dl>
</div>
</div>
</td>
<td id="portal-column-content">
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<div class="">
<span id="contentTopLeft"></span>
<span id="contentTopRight"></span>
<dl class="portalMessage info" id="kssPortalMessage" style="display:none">
<dt>Info</dt>
<dd></dd>
</dl>
<div id="content">
<h1 id="parent-fieldname-title" class="documentFirstHeading">
MCMCMC
</h1>
<div id="parent-fieldname-description" class="documentDescription">
This presents generalized code for conducting Metropolis Coupled MCMC using ADMB called within R
</div>
<div id="content-core">
<dl>
<dt class="">
<span class="summary">
<img width="16" height="16" src="http://www.admb-project.org/application.png" alt="File" />
<a href="mcmcmc/wrapper/view.html" class="contenttype-file state-missing-value url">Wrapper</a>
</span>
<span class="documentByLine">
</span>
</dt>
<dd>
<span class="description">File to conduct MCMCMC using ADMB within R</span>
</dd>
<dt class="">
<span class="summary">
<img width="16" height="16" src="http://www.admb-project.org/application.png" alt="File" />
<a href="mcmcmc/functions/view.html" class="contenttype-file state-missing-value url">Functions</a>
</span>
<span class="documentByLine">
</span>
</dt>
<dd>
<span class="description">Functions used by wrapper</span>
</dd>
<dt class="">
<span class="summary">
<img width="16" height="16" src="http://www.admb-project.org/application.png" alt="File text/x-perl" />
<a href="mcmcmc/tpl/view.html" class="contenttype-file state-missing-value url">TPL</a>
</span>
<span class="documentByLine">
</span>
</dt>
<dd>
<span class="description">TPL used for example</span>
</dd>
<dt class="">
<span class="summary">
<img width="16" height="16" src="http://www.admb-project.org/exe.png" alt="File application/x-msdos-program" />
<a href="mcmcmc/exe/view.html" class="contenttype-file state-missing-value url">EXE</a>
</span>
<span class="documentByLine">
</span>
</dt>
<dd>
<span class="description">compiled EXE for example</span>
</dd>
<dt class="">
<span class="summary">
<img width="16" height="16" src="http://www.admb-project.org/image.png" alt="File C source code" />
<a href="mcmcmc/admb_mcmc/view.html" class="contenttype-file state-missing-value url">ADMB_MCMC</a>
</span>
<span class="documentByLine">