Skip to content

Latest commit

 

History

History
34 lines (28 loc) · 1.22 KB

TODO.md

File metadata and controls

34 lines (28 loc) · 1.22 KB

Roadmap items

  • Webserver
  • Cross platform (should be tested)
  • Single sample visualization: Phylogeny, tools agreement Venn diagram, identification score histogram of the
  • Multiple samples visualization: Anvio wheel, heatmap.
  • Cloud-based with bidding system
  • Test cases
  • Code documentation.
  • GitHub (follow the 10 rules)
  • Validation using simulated data.
  • Validation using Mock libraries.
  • Tutorials.
  • Add novel analysis idea (will discuss once we finish all the above).

VIZ

  • Tools agreement Venn diagram
  • Phylogeny visualization: Radial Tidy Tree: https://bl.ocks.org/mbostock/4063550
  • Enhance Abundance visualization: using hierarchial color palette to represent abundance tree. References: (1) Martijn Tennekes and Edwin de Jonge, Tree Colors: Color Schemes for Tree-Structured Data.
  • Identification score histogram

Backend

Wishlist

  • Integrate anvio.

Other