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DESCRIPTION
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DESCRIPTION
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Package: ggtree
Type: Package
Title: an R package for visualization of tree and annotation data
Version: 3.3.1.900
Authors@R: c(
person("Guangchuang", "Yu", email = "[email protected]", role = c("aut", "cre", "cph"),
comment = c(ORCID = "0000-0002-6485-8781")),
person("Tommy Tsan-Yuk", "Lam", email = "[email protected]", role = c("aut", "ths")),
person("Shuangbin", "Xu", email = "[email protected]", role = "aut",
comment = c(ORCID="0000-0003-3513-5362")),
person("Lin", " Li", email = "[email protected]", role = "ctb"),
person("Bradley", "Jones", email = "[email protected]", role = "ctb"),
person("Justin", "Silverman", email = "[email protected]", role = "ctb"),
person("Watal M.", "Iwasaki", email = "[email protected]", role = "ctb"),
person("Yonghe", "Xia", email = "[email protected]", role = "ctb"),
person("Ruizhu", "Huang", email = "[email protected]", role = "ctb")
)
Maintainer: Guangchuang Yu <[email protected]>
Description: 'ggtree' extends the 'ggplot2' plotting system which implemented
the grammar of graphics. 'ggtree' is designed for visualization and annotation
of phylogenetic trees and other tree-like structures with their annotation data.
Depends:
R (>= 3.5.0)
Imports:
ape,
aplot (>= 0.0.4),
dplyr,
ggplot2 (>= 3.0.0),
grid,
magrittr,
methods,
purrr,
rlang,
ggfun,
yulab.utils,
tidyr,
tidytree (>= 0.3.9),
treeio (>= 1.8.0),
utils,
scales
Suggests:
emojifont,
ggimage,
ggplotify,
grDevices,
knitr,
prettydoc,
rmarkdown,
stats,
testthat,
tibble,
glue
Remotes:
GuangchuangYu/treeio
VignetteBuilder: knitr
ByteCompile: true
Encoding: UTF-8
License: Artistic-2.0
URL: https://yulab-smu.top/treedata-book/ (book), http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12628 (paper)
BugReports: https://github.com/YuLab-SMU/ggtree/issues
Packaged: 2014-12-03 08:16:14 UTC; root
biocViews: Alignment, Annotation, Clustering, DataImport,
MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
RoxygenNote: 7.1.2
Roxygen: list(markdown = TRUE)