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environment.yaml
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environment.yaml
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name: analyze_motifs
channels:
- anaconda
- conda-forge
- bioconda
- r
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- atomicwrites=1.4.0=pyh9f0ad1d_0
- attrs=21.4.0=pyhd8ed1ab_0
- backports=1.1=pyhd3eb1b0_0
- backports.functools_lru_cache=1.6.4=pyhd3eb1b0_0
- backports_abc=0.5=py27_0
- bedtools=2.26.0=0
- blas=1.0=openblas
- brotlipy=0.7.0=py27h516909a_1000
- bx-python=0.8.4=py27hebb334c_0
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.18.1=h7f8727e_0
- ca-certificates=2021.10.8=ha878542_0
- certifi=2019.11.28=py27h8c360ce_1
- cffi=1.14.0=py27hd463f26_0
- chardet=3.0.4=py27h8c360ce_1006
- colorama=0.4.4=pyh9f0ad1d_0
- conda=4.8.3=py27h8c360ce_1
- conda-package-handling=1.6.0=py27hdf8410d_2
- configparser=3.7.3=py27h8c360ce_2
- contextlib2=0.6.0.post1=py_0
- cryptography=2.8=py27h2c19f6a_2
- cycler=0.10.0=py27_0
- dbus=1.13.18=hb2f20db_0
- emboss=6.6.0=hf657eab_5
- enum34=1.1.10=py27h8c360ce_1
- expat=2.4.4=h295c915_0
- fontconfig=2.13.1=h6c09931_0
- freetype=2.11.0=h70c0345_0
- funcsigs=1.0.2=py27_0
- functools32=3.2.3.2=py27_1
- futures=3.3.0=py27h8c360ce_1
- glib=2.56.2=hd408876_0
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- homer=4.11=pl5321h9f5acd7_7
- htseq=0.11.3=py27hb3f55d8_0
- icu=58.2=he6710b0_3
- idna=2.10=pyh9f0ad1d_0
- importlib_metadata=1.5.0=py27_0
- ipaddress=1.0.23=py_0
- jpeg=9e=h7f8727e_0
- kiwisolver=1.1.0=py27he6710b0_0
- krb5=1.19.2=hac12032_0
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- libcurl=7.82.0=h0b77cf5_0
- libdeflate=1.10=h7f98852_0
- libedit=3.1.20210910=h7f8727e_0
- libev=4.33=h7f8727e_1
- libffi=3.2.1=he1b5a44_1007
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=12.1.0=h8d9b700_16
- libgd=2.3.3=h695aa2c_0
- libgfortran-ng=7.5.0=ha8ba4b0_17
- libgfortran4=7.5.0=ha8ba4b0_17
- libgomp=12.1.0=h8d9b700_16
- libnghttp2=1.46.0=hce63b2e_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.18=hf726d26_0
- libpng=1.6.37=hbc83047_0
- libsolv=0.7.22=h6239696_0
- libssh2=1.10.0=h8f2d780_0
- libstdcxx-ng=12.1.0=ha89aaad_16
- libtiff=4.2.0=h85742a9_0
- libuuid=1.0.3=h7f8727e_2
- libwebp-base=1.2.2=h7f8727e_0
- libxcb=1.14=h7b6447c_0
- libxml2=2.9.12=h03d6c58_0
- libzlib=1.2.11=h166bdaf_1014
- lz4-c=1.9.3=h295c915_1
- lzo=2.10=h7b6447c_2
- mamba=0.1.0=py27hc9558a2_2
- matplotlib=2.2.3=py27hb69df0a_0
- more-itertools=5.0.0=py_0
- ncurses=6.3=h27087fc_1
- numpy=1.16.4=py27h99e49ec_0
- numpy-base=1.16.4=py27h2f8d375_0
- openssl=1.1.1o=h166bdaf_0
- packaging=20.9=pyh44b312d_0
- pandas=0.24.2=py27he6710b0_0
- pathlib2=2.3.5=py27h8c360ce_1
- patsy=0.5.1=py27_0
- pcre=8.45=h295c915_0
- perl=5.32.1=2_h7f98852_perl5
- pip=20.1.1=pyh9f0ad1d_0
- pluggy=0.12.0=py_0
- py=1.11.0=pyh6c4a22f_0
- pybedtools=0.8.0=py27he860b03_1
- pycosat=0.6.3=py27hdf8410d_1004
- pycparser=2.21=pyhd8ed1ab_0
- pyopenssl=19.1.0=py_1
- pyparsing=2.4.7=pyhd3eb1b0_0
- pyqt=5.9.2=py27h05f1152_2
- pysam=0.19.0=py27hc2126ed_0
- pysocks=1.7.1=py27h8c360ce_1
- pytest=4.6.4=py27_0
- python=2.7.15=h5a48372_1011_cpython
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-lzo=1.12=py27h42e1302_1001
- python_abi=2.7=1_cp27mu
- pytz=2021.3=pyhd3eb1b0_0
- qt=5.9.7=h5867ecd_1
- readline=8.1=h46c0cb4_0
- requests=2.25.1=pyhd3deb0d_0
- ruamel_yaml=0.15.80=py27hdf8410d_1001
- scandir=1.10.0=py27hdf8410d_1
- scikit-learn=0.20.3=py27h22eb022_0
- scipy=1.2.1=py27he2b7bc3_0
- seaborn=0.9.0=py27_0
- setuptools=44.0.0=py27_0
- singledispatch=3.7.0=pyhd3eb1b0_1001
- sip=4.19.8=py27hf484d3e_0
- six=1.16.0=pyh6c4a22f_0
- sqlite=3.38.5=h4ff8645_0
- statsmodels=0.10.1=py27hdd07704_0
- subprocess32=3.5.4=py27h7b6447c_0
- tk=8.6.12=h27826a3_0
- tornado=5.1.1=py27h7b6447c_0
- tqdm=4.64.0=pyhd8ed1ab_0
- unzip=6.0=h7f98852_3
- urllib3=1.26.9=pyhd8ed1ab_0
- wcwidth=0.2.5=pyh9f0ad1d_2
- wget=1.20.1=h20c2e04_0
- wheel=0.37.1=pyhd8ed1ab_0
- xz=5.2.5=h7b6447c_0
- yaml=0.2.5=h7f98852_2
- zipp=1.0.0=py_0
- zlib=1.2.11=h166bdaf_1014
- zstd=1.4.5=h9ceee32_0
- pip:
- cairocffi==0.9.0
- cairosvg==1.0.22
- pycairo==1.18.2