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NEWS
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CHANGES IN VERSION 1.29.0
------------------------
Notes
o Fix build error on Windows and Mac.
CHANGES IN VERSION 1.17.1
------------------------
Notes
o Fix a small bug in function methodsMerge.
CHANGES IN VERSION 1.17.0
------------------------
Notes
o Update to the latest version of different tools.
CHANGES IN VERSION 1.7.1
------------------------
Notes
o Fixed a bug in svAnnotation.
CHANGES IN VERSION 1.2.0
------------------------
Notes
o Add support to SV prediction programs Lumpy
and softSearch.
o Modify methodsMerge to make it more robust.
o Modify all the read functions to coordinate
methodsMerge.
CHANGES IN VERSION 1.1.4
------------------------
Notes
o Modify svAnnotation and geneAnnotation to deal with
more versatile genome annotation files.
o Modify plotChromosome to deal with exceptions.
CHANGES IN VERSION 1.1.3
------------------------
Notes
o Modify readDelly and readSvseq to deal with
exceptions in the output of SV prediction programs.
o Add more parameters to the function 'methodsMerge' to
make it more robust.
CHANGES IN VERSION 1.1.2
------------------------
Notes
o Modify readPindel and readBreakDancer to deal with
exceptions in the output of SV prediction programs.
CHANGES IN VERSION 1.0.1
------------------------
Notes
o Add more parameters to the function 'methodsMerge' to
accept user defined thresholds.
CHANGES IN VERSION 0.99.3
------------------------
Notes
o Improvement of the vigenette to make it more comprehensive.
o Removal of useless example dataset.