- 1. Search a genome by gene IDs
- 2. Search a genome by location
- 3. Genomic distribution of genes
- 4. Browse transcription factors/regulators of a genome
- 5. Genome synteny
- 6. Structural variations
- 7. JBrowse
- 8. Browse SNPs in a user-input genomic region
- 9. Search and retrieve SNPs in a user-input genomic region
- 10. Linkage disequilibrium analysis of SNPs
- 11. Nucleotide diversity analysis of SNPs
- 12. Allele frequency analysis of user-input SNP sites
- 13. Search and retrieve INDELs
- 14. Gene expression analysis
- 15. Gene co-expression analysis
- 16. Search a genome by BLAST
- 17. Design primers for a user-input genomic region or gene locus
- 18. Search orthologous gene groups among 39 genomes
- 19. GO Annotation of a user-input gene list
- 20. GO enrichment analysis of a user-input gene list
- 21. KEGG Annotation of a user-input gene list
- 22. KEGG enrichment analysis of a user-input gene list
- 23. Information of 2898 soybean accessions