DESCRIPTION

Package: MSstatsSampleSize
Type: Package
Title: Simulation tool for optimal design of high-dimensional MS-based proteomics experiment
Version: 1.2.2
Date: 2020-07-15
Authors@R: c(
    person("Ting","Huang", , "thuang0703@gmail.com", c("aut", "cre")), 
    person("Meena","Choi", , "mnchoi67@gmail.com", c("aut")),
    person("Sumedh","Sankhe", , "Sumedh.sankhe@gmail.com", c("aut")),
    person("Olga","Vitek", , "o.vitek@northeastern.edu", role="aut")) 
Description: The packages estimates the variance in the input protein abundance data 
    and simulates data with predefined number of biological replicates based on the variance estimation. 
    It reports the mean predictive accuracy of the classifier and mean protein importance over multiple iterations of the simulation. 
Imports: ggplot2, BiocParallel, caret, gridExtra, reshape2, stats, utils, grDevices, graphics, MSstats
Suggests: BiocStyle, knitr, rmarkdown, testthat
VignetteBuilder: knitr
biocViews: MassSpectrometry, Proteomics, Software, DifferentialExpression, Classification, PrincipalComponent, 
    ExperimentalDesign, Visualization
License: Artistic-2.0
Depends: R (>= 3.6)
Encoding: UTF-8
LazyData: true
URL: http://msstats.org
BugReports: https://groups.google.com/forum/#!forum/msstats
RoxygenNote: 7.1.0