diff --git a/.github/workflows/test_sample_sheet_all.yml b/.github/workflows/test_sample_sheet_all.yml index 684d479..91816c3 100755 --- a/.github/workflows/test_sample_sheet_all.yml +++ b/.github/workflows/test_sample_sheet_all.yml @@ -26,7 +26,7 @@ jobs: run: | docker --version - nextflow run . -profile docker -c .github/workflows/github_actions.config --sample_sheet .github/workflows/sample_sheet_all.csv --assembler raven + nextflow run . -profile docker -c .github/workflows/github_actions.config --sample_sheet .github/workflows/sample_sheet_all.csv tree donut_falls diff --git a/.github/workflows/test_sample_sheet_both_only.yml b/.github/workflows/test_sample_sheet_both_only.yml index a3906d8..60c04c7 100755 --- a/.github/workflows/test_sample_sheet_both_only.yml +++ b/.github/workflows/test_sample_sheet_both_only.yml @@ -26,7 +26,7 @@ jobs: run: | docker --version - nextflow run . -profile docker -c .github/workflows/github_actions.config --sample_sheet .github/workflows/sample_sheet_both.csv --assembler raven + nextflow run . -profile docker -c .github/workflows/github_actions.config --sample_sheet .github/workflows/sample_sheet_both.csv tree donut_falls diff --git a/.github/workflows/test_sample_sheet_lr_only.yml b/.github/workflows/test_sample_sheet_lr_only.yml index bf00d16..d2face7 100755 --- a/.github/workflows/test_sample_sheet_lr_only.yml +++ b/.github/workflows/test_sample_sheet_lr_only.yml @@ -26,7 +26,7 @@ jobs: run: | docker --version - nextflow run . -profile docker -c .github/workflows/github_actions.config --sample_sheet .github/workflows/sample_sheet_lr.csv --assembler raven + nextflow run . -profile docker -c .github/workflows/github_actions.config --sample_sheet .github/workflows/sample_sheet_lr.csv tree donut_falls