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Can not got a file of "pvalues.txt" #377

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xiaoxiaofuyou opened this issue Jun 24, 2022 · 0 comments
Open

Can not got a file of "pvalues.txt" #377

xiaoxiaofuyou opened this issue Jun 24, 2022 · 0 comments

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@xiaoxiaofuyou
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xiaoxiaofuyou commented Jun 24, 2022

Hi, team, thanks for your efforts to cpdb. But i want to know why this method can't get a pvalue file, following the method:

cellphonedb method degs_analysis meta.tsv data_mtx.csv DEGs.tsv --counts-data=gene_name --threshold 0.1

And if i use this method to run cpdb, how can i use a simple and fast way to plot my figures?
Best!

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