Skip to content
This repository has been archived by the owner on Oct 26, 2022. It is now read-only.

Invalid Counts data #344

Open
nobie666 opened this issue Sep 8, 2021 · 1 comment
Open

Invalid Counts data #344

nobie666 opened this issue Sep 8, 2021 · 1 comment

Comments

@nobie666
Copy link

nobie666 commented Sep 8, 2021

Hello, I have caught a problem when running the statistical method: Invalid Counts data using the reference data--test_counts.txt and test_meta.txt. Could you help me solve the problem? Thank you so much!
image

@prete
Copy link
Collaborator

prete commented Sep 8, 2021

Hi @nobie666 thank you for using CellPhoneDB. Looks like you've got the order of the arguments wrong.
You need to provide the meta first and then counts second like this:

cellphonedb method statistical_analysis test_meta.txt test_counts.txt

Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants