-
Notifications
You must be signed in to change notification settings - Fork 0
/
index.html
436 lines (394 loc) · 24.7 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
<!DOCTYPE html>
<html lang="en">
<head>
<title>TIBBE-BrainWeb</title>
<link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/4.0.0/css/bootstrap.min.css" integrity="sha384-Gn5384xqQ1aoWXA+058RXPxPg6fy4IWvTNh0E263XmFcJlSAwiGgFAW/dAiS6JXm" crossorigin="anonymous">
<link href="https://fonts.googleapis.com/css?family=Roboto:100,300,400,500,700,900|Material+Icons" rel="stylesheet" type="text/css">
<link href="https://cdn.jsdelivr.net/npm/[email protected]/dist/quasar.min.css" rel="stylesheet" type="text/css">
<link href="https://cdn.jsdelivr.net/npm/animate.css@^3.5.2/animate.min.css" rel="stylesheet">
<link rel="shortcut icon" type="image/x-icon" href="./favicon.ico" />
<link href="https://fonts.googleapis.com/css?family=Raleway:100,300,400,500,900" rel="stylesheet">
<link rel="stylesheet" type="text/css" href="/css/main.css">
<link rel="stylesheet" type="text/css" href="/community/community.css">
</head>
<body>
<!-- Firebase authentication -->
<div id="firebaseui-auth-container" class="auth-dialog"></div>
<!-- navigation bar -->
<!-- currently, the fixed top class is added, so it sticks to the top -->
<!-- data value of nav bar corresponds to id in each section -->
<nav class="navbar navbar-expand-lg fixed-top ">
<a class="navbar-brand" href="/" >
<div class="logo_brainweb">
<p style="padding-left:4em;color:white;cursor:pointer;font-size:14px;font-weight:300;line-height:2.7;vertical-align: middle;">TIBBE-BrainWeb</p>
</div>
</a>
<button
class="navbar-toggler landing-page myCollapsedMenuBarIcon"
id="myMenuBtn"
type="button"
data-toggle="collapse"
data-target="#myMenu"
aria-controls="myMenu"
aria-expanded="false"
aria-label="Toggle navigation"
style="padding:0;border:none; width:1.5em;height:1.5em;"
onclick="this.blur();"
></button>
<div class="collapse navbar-collapse" id="myMenu" style="width:100%;">
<ul class="navbar-nav mr-4" >
<li class="nav-item">
<a class="nav-link" href="/">TIBBE-BrainWeb</a>
</li>
<li class="nav-item">
<a class="nav-link" href="/projects/">Projects</a>
</li>
<li class="nav-item">
<span class="nav-link" id="loginStatus" style="border-bottom:none">
Sign In
</span>
</li>
<li class="nav-item" id="userAvatar">
<img class="userIcon"/>
</li>
</ul>
</div>
</nav>
<!-- main -->
<div id="q-app">
<!-- part 1: Community network : TIBBE community -->
<div id="community">
<div id="conftitle">
<h1>TIBBE-BrainWeb</h1>
</div>
<div id="search-field">
<q-select
rounded outlined
label="Find skills"
color="white"
v-model="searchItems"
use-input
use-chips
multiple
hide-dropdown-icon
input-debounce="0"
new-value-mode="add-unique"
:options="searchOptions"
@filter="searchFn"
@input="searchAdd"
>
<!-- <q-icon name="search" @click.stop style="font-size: 24px; height: inherit"/> -->
</q-select>
</div>
<!-- network -->
<div id="network"></div>
<!-- <div id="networkContainer">
<div id="network"></div>
<div id="networkInfo" v-if="!spinning && !userSignedIn">
<a href="#" onclick="signIn(app)">Join the network!</a>
</div>
</div> -->
<!-- spinner -->
<q-spinner-ball
color="white"
size="4em"
v-if="spinning"
style="position:absolute;top:50%;left:50%;transform: translate( -50%, -50%);z-index:1000"
></q-spinner-ball>
<!-- <q-dialog v-model="displaySignIn" id="sign-in">
<q-card>
<q-card-section>
<p>
This is the <strong>TIBBE-BrainWeb</strong> community graph.
Add yourself to the graph by signing in with GitHub, add your skills to take your place in the network graph.
</p>
<p>
The TIBBE community is part of the larger <a href="https://brain-web.github.io">BrainWeb community</a>
and you can explore your connections within the wider network.
</p>
<div id="firebaseui-auth-container"></div>
</q-card-section>
</q-card>
</q-dialog> -->
<div class="container" style="margin-top: 1em">
<!-- skills card -->
<div v-cloak class="row">
<!-- other person's card -->
<div v-if="cardUID !== uid">
<q-dialog v-model="displayCard">
<q-card style="height:400px;width:400px">
<q-card-section>
<q-chip>
<q-avatar round size="48px">
<img :src="cardImgSrc" />
</q-avatar>
<a v-cloak class="col text-h6" :href="cardGitHubURL">
{{cardDisplayName}}
</a>
</q-chip>
</q-card-section>
<q-card-section style="background: hsla(0,0%,100%,0.07);border-radius:4px 4px 0 0;margin:16px">
<q-chip v-cloak color="dark" v-for="skill in cardSkills">
{{skill}}
</q-chip>
</q-card-section>
</q-card>
</q-dialog>
</div>
<!-- logged person's card -->
<div v-else>
<q-dialog v-model="displayCard" @hide="updateUser">
<q-card style="height:400px;width:400px">
<q-card-section>
<q-chip>
<q-avatar round size="48px">
<img :src="`https://avatars3.githubusercontent.com/u/${uid}?v=4`" />
</q-avatar>
<a v-cloak class="col text-h6" :href="`https://github.com/${userGitHubName}`">
{{userDisplayName}}
</a>
</q-chip>
</q-card-section>
<q-card-section>
<q-select
label="Skills"
filled
v-model="people[people.map((o)=>o.uid).indexOf(uid)].skills"
use-input
use-chips
multiple
hide-dropdown-icon
input-debounce="0"
new-value-mode="add-unique"
:options="skills"
@filter="filterFn"
@new-value="createValue"
></q-select>
</q-card-section>
</q-card>
</q-dialog>
</div>
</div>
</div> <!-- end of container -->
<!-- part 2: about TIBBE -->
<div class="row" id="about">
<div class="container">
<h4>TIBBE-BrainWeb</h4>
<!-- <div v-cloak v-if="!spinning" class="row"> -->
<p><br />
A permanent space for the <i>The Integrative Biology of Brain Evolution</i> network community to find collaborators, projects and start working together.<br />
</p>
<p>
We aim at fostering sharing data, tools and our experience across scales and taxa. The TIBBE-Web has been created to add a community component that allows to find collaborators and projects across labs.<br />
The TIBBE-Web is part of the larger <a href="https://brain-web.github.io" target="_blank">BrainWeb</a> and you can explore your connections in the larger network beyond brain evolution.
<br/><br/>
<br/>
</p>
</div>
</div>
<!-- video presenting tibbe -->
<div class="row" id="videopresentation">
<div class="container">
<h4>TIBBE at a glance</h4>
<p><br />
A short video on what drives us.
</p>
<iframe
width="1000"
height="600"
src="https://www.youtube.com/embed/FtjmoHKQa-k?si=DcXkecrd4Rh7crGz" title="YouTube video player"
frameborder="0"
style="border: 1px solid #EEE;border-radius:3px"
allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" referrerpolicy="strict-origin-when-cross-origin"
allowfullscreen>
</iframe>
<!--
webkitallowfullscreen="true"
mozallowfullscreen="true"
allow="microphone; camera;"
-->
</div>
</div>
<!-- part 3: Background -->
<div class="row" id="additional-content">
<div class="container">
<h4>Background</h4>
<!-- <div v-cloak v-if="!spinning" class="row"> -->
<p><br/>
Brains are the product of evolutionary processes that act on the entire organism. Selection acts directly on behaviour, but the brain also mediates behavioural responses to the environment. Behavioural differences stem from developmental variability in the production of neural circuits, but some circuits may be more robust to developmental noise than others, and some neural traits may be significantly constrained. These dynamic processes and interactions shape the way the brain evolves across time, and in response to different selection regimes. Disentangling these interactions is difficult, making it challenging to identify specific factors that drive evolution. Yet, uncovering general principles that determine the evolvability of neural systems can illuminate factors that have influenced brain evolution.<br />
</p>
<p>
Mechanisms of brain evolution are inevitably complex, and as such, identifying general principles affecting how brains and behaviour evolve is a major challenge. TIBBE – The Integrative Biology of Brain Evolution – aims to facilitate advances in this endeavour by encouraging integrative approaches, across disciplines, study systems and biological levels. Our collaborative network will encourage and support synthesising data, methods and ideas from multiple studies and systems to generate more comprehensive insights into the evolutionary history of the brain.
<br/>
</p>
<p>
Our network is established at a time when brain evolution research is rapidly advancing, with new comparative brain data being generated through the use of a variety of techniques from behavioural observation, to advanced imaging techniques, spanning single cells and synapses to whole brain networks. In parallel, new developments in comparative statistics allow for integration across data types, and for more powerful and informative phylogenetic analyses. It is therefore timely to establish an infrastructure to exchange these data across scales and modalities, curate resources, tools and tutorials on how to use and integrate them, and build collaborations around a broader comparative framework that could foster insights in general mechanisms and patterns underlying brain evolution.
<br/><br/>
</p>
<h4>Objectives</h4>
<p><br/>
The broad goal of TIBBE is to encourage and support synthesising data, methods and ideas from multiple studies and systems to generate more comprehensive insights into the evolutionary history of the brain. Our three objectives focus on active research areas , and we will utilise the broad expertise within TIBBE to develop fundamental questions about brain evolution and an interdisciplinary research program.<br />
</p>
<p>
i. Identify <b style="font-weight:700;"> common internal mechanisms of brain evolution, across species</b>. What developmental, physical, and evolutionary drivers and constraints act on brain composition and network architecture across animals? <br/>
<br/>
ii. Address <b style="font-weight:700;">how the brain evolves within the greater context of organismal functional physiology and ecology</b>. How do the evolution of brain structure, connectivity, and function interact with changes in the body, physiology, ecology and environment? <br/>
<br/>
iii. Determine <b style="font-weight:700;">whether certain brain structures and functions are more evolvable than others</b>. Do all behavioural circuits evolve according to similar rules? To what extent is evolvability influenced by the particular nature of the behaviour, features of the neural circuits, and/or other factors such as genetic and mechanical influences during development?
</p>
<p>
Our overriding belief is that to address these objectives we need to integrate analytical approaches and data across diverse species. The study of brain evolution is divided into communities with specific areas of expertise; ranging from molecular genetics, to comparative anatomy, paleoneurology, and neuroethology. Researchers are further divided according to the taxa they study. Currently, few bridges extend across these communities to identify common themes, motivations. Creating these bridges will support future endeavours aiming at a comprehensive understanding of brain evolution.
<br/><br/>
</p>
<h4>Outcomes</h4>
<p><br/>
TIBBE will bring together researchers working on brain evolution to exchange ideas, share expertise on tools and methods, share data, and discuss new findings. The network will be open to all brain evolution researchers to participate in events, (co-)organise events, and contribute to the web platform. This will facilitate interaction and collaboration among the wider brain evolution community, ensuring active integration of early-career researchers, creating an inclusive and diverse network.
</p>
</div>
</div>
<!-- part 4 Organisers -->
<div v-cloak v-if="!spinning" class="row" id="organizers">
<div v-cloak v-if="!spinning" class="container" style="background: rgba(0,0,0,0.2);">
<h4>Team of organisers</h4>
<div v-cloak v-if="!spinning" class="row">
<div id="TableContainer">
<div class="TableDescription" style="padding-bottom:2rem;">
<div id="organizerColumns">
<div id="organizerColumnLeft">
<div class="organizerCard">
<p>
<a href="https://katjaq.github.io">Katja Heuer</a> (Institut Pasteur, France)<br/>
<a style="font-weight: 300;" href="https://twitter.com/katjaQheuer"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@katjaQheuer</a>
</p>
</div>
<div class="organizerCard">
<p>
<a href="https://www.shmontgomery.co.uk/index.html">Stephen H Montgomery</a> (University of Bristol, UK)<br/>
<a style="font-weight: 300;" href="https://twitter.com/EBaBlab"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@EBaBlab</a>
</p>
</div>
</div><!--organizerColumn left-->
<div id="organizerColumnRight">
<div class="organizerCard">
<p>
<a href="https://sites.google.com/site/alexandraallisonsousa">Alexandra A de Sousa</a> (Auburn University, USA)<br/>
<a style="font-weight: 300;" href="https://x.com/alealisousa"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@alealisousa</a>
</p>
</div>
<div class="organizerCard">
<p>
<a href="https://neuroanatomy.github.io">Roberto Toro</a> (Institut Pasteur, France)<br/>
<a style="font-weight: 300;" href="https://twitter.com/R3RT0"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@R3RT0</a>
</p>
</div>
</div><!--organizerColumn right-->
</div> <!--organizerColumns-->
</div> <!--TableDescription-->
</div> <!--TableContainer-->
</div> <!--row of organizer section-->
<!-- Organising committee -->
<h4>Organising committee</h4>
<div v-cloak v-if="!spinning" class="row">
<div id="TableContainer">
<div class="TableDescription" style="padding-bottom:2rem;">
<div id="organizerColumns">
<div id="organizerColumnLeft">
<div class="organizerCard">
<p>
<a href="https://www.behav.iee.unibe.ch/about_us/personen/dr_triki_zegni/index_eng.html">Zegni Triki</a> (Bern University, Switzerland)<br/>
<a style="font-weight: 300;" href="https://x.com/trikizegni"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@trikizegni</a>
</p>
</div>
<div class="organizerCard">
<p>
<a href="https://www.gub.uy/ministerio-educacion-cultura/politicas-y-gestion/desarrollo-evolucion-neural">Maria Castello</a> (Instituto de Investigaciones Biológicas Clemente Estable (IIBCE), Ministerio de Educación y Cultura (MEC), Uruguay)<br/>
<a style="font-weight: 300;" href="https://x.com/maritacastello"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@maritacastello</a>
</p>
</div>
<div class="organizerCard">
<p>
<a href="https://www.crick.ac.uk/research/labs/lucia-prieto-godino">Lucia Prieto-Godino</a> (The Francis Crick Institute, UK)<br/>
<a style="font-weight: 300;" href="https://x.com/neuroluci"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@neuroluci</a>
</p>
</div>
<div class="organizerCard">
<p>
<a href="http://www.rbmars.dds.nl/lab.html">Rogier Mars</a> (University of Oxford & Donders Institute, Radboud University Nijmegen, UK and The Netherlands)<br/>
<a style="font-weight: 300;" href="https://x.com/neuroecologylab"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@neuroecologylab</a>
</p>
</div>
</div><!--organizerColumn left-->
<div id="organizerColumnRight">
<div class="organizerCard">
<p>
<a href="https://carmen-falcone.com">Carmen Falcone</a> (SISSA Scuola Internazionale Superiore di Studi Avanzati, Italy)<br/>
<a style="font-weight: 300;" href="https://x.com/CarmenFalcone6"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@CarmenFalcone6</a>
</p>
</div>
<div class="organizerCard">
<p>
<a href="https://www.researchgate.net/profile/Kristina-Kverkova">Kristina Kverkova</a> (Charles University, Czech Republic)<br/>
<a style="font-weight: 300;" href="https://x.com/kkverkova"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@kkverkova</a>
</p>
</div>
<div class="organizerCard">
<p>
<a href="https://institutducerveau-icm.org/en/member/?user=1622">Ornella Bertrand</a> (Institut Català de Paleontologia Miquel Crusafont, Spain)<br/>
<a style="font-weight: 300;" href="https://x.com/OrnellaBertrand"><img style="width:1.8rem;transform:translate(0,0px);margin-right:5px;" src="./images/landing/twitter_white.png" /img>@OrnellaBertrand</a>
</p>
</div>
</div><!--organizerColumn right-->
</div> <!--organizerColumns-->
</div> <!--TableDescription-->
</div> <!--TableContainer-->
</div> <!--row of organizer section-->
</div> <!--container of organizer section-->
</div> <!--organizers div-->
</div> <!-- end of community div -->
<!-- footer -->
<div class="row" id="CoC" v-if="!spinning" style="width:100%; position:relative; bottom:0px; margin:0;padding-top:1%;border:0; color:white; background:#111111;">
<p style="text-align: center; font-size: 0.9rem; width: 100%">Made with love ❤ <a href="https://github.com/brain-web/brain-web.github.io/blob/contributors" target="_blank">BrainWeb</a> ❤ Please respect the <a href="https://github.com/TIBBE-network.github.io/blob/main/CoC.md" target="_blank">TIBBE Code of Conduct.</a></p>
</div>
</div> <!-- end of q-app -->
<!-- sentry -->
<script src="/js/sentry.min.js" data-lazy="no"></script>
<!-- Vue and Quasar -->
<script src="https://cdn.jsdelivr.net/npm/vue@^2.0.0/dist/vue.min.js"></script>
<script src="https://cdn.jsdelivr.net/npm/[email protected]/dist/quasar.umd.min.js"></script>
<script src="https://cdn.jsdelivr.net/npm/[email protected]/dist/icon-set/svg-material-icons.umd.min.js"></script>
<!-- Firebase -->
<script defer src="https://www.gstatic.com/firebasejs/ui/4.5.0/firebase-ui-auth.js"></script>
<link type="text/css" rel="stylesheet" href="https://www.gstatic.com/firebasejs/ui/4.5.0/firebase-ui-auth.css" />
<script defer src="https://www.gstatic.com/firebasejs/7.12.0/firebase-app.js"></script>
<script defer src="https://www.gstatic.com/firebasejs/7.12.0/firebase-auth.js"></script>
<script defer src="https://www.gstatic.com/firebasejs/7.12.0/firebase-database.js"></script>
<script defer src="/js/init-firebase.js"></script>
<!-- D3 and BrainWeb graph -->
<script src="https://d3js.org/d3.v5.min.js"></script>
<script type="module">
import * as BW from "/community/brainweb.js";
// const circleName = "BrainWeb";
// const circleSkill = null;
const circleSkill = "TIBBE";
const filterSkills = ["Evolution", "Histology", "Neuroimaging", "Brain evolution", "Primate", "Non-human primate", "Macaque", "Comparative MRI", "Open Science", "Data sharing"].map((s)=>s.toLowerCase());
if(circleSkill) {
filterSkills.push(circleSkill);
}
BW.init({
appSel: "#q-app",
networkSel: "#network",
circleName: "BrainWeb",
circleSkill,
filterSkills
});
</script>
<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=UA-138729622-3"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());
gtag('config', 'UA-138729622-3');
</script>
</body>
</html>